KEGG   Shewanella halifaxensis: Shal_0402
Entry
Shal_0402         CDS       T00654                                 
Name
(GenBank) ERCC4 domain protein
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
shl  Shewanella halifaxensis
Pathway
shl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:shl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Shal_0402
   03460 Fanconi anemia pathway
    Shal_0402
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shl03032]
    Shal_0402
   03400 DNA repair and recombination proteins [BR:shl03400]
    Shal_0402
DNA replication proteins [BR:shl03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    Shal_0402
DNA repair and recombination proteins [BR:shl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     Shal_0402
SSDB
Motif
Pfam: ERCC4 HHH_2 HHH_5 HHH HHH_3 UPF0758_N 5_3_exonuc
Other DBs
NCBI-ProteinID: ABZ74977
UniProt: B0TQI4
LinkDB
Position
complement(471098..471766)
AA seq 222 aa
MNKPPIEIVYDDRERAEILIKQLSKQTDLRLVRKRLNLGDYQINEWLIERKTLSDFVISL
CDGRLFSQVSRLSKSPNNTALLIEGSSRDIAAYGITREAVMGALCSIAINFNMPILRSLS
QAESAKILYFCATQLNSWETGVISNGRKPKRHKNRQLFILQSLPQVGPKLAKRLLIHFES
IEAVFTAPEEELLKVEGIGQEKARGIRGILTSTNKRGHNQPD
NT seq 669 nt   +upstreamnt  +downstreamnt
atgaataaaccaccaattgagatagtttatgacgatagagaacgtgcggagatattgatt
aagcaactatcaaaacaaacggatcttcgtttagtcagaaaacgactaaacttgggagat
tatcagataaacgaatggcttattgaaagaaaaacactctcagatttcgttatttcactt
tgtgatggcagactattttcacaggtatcaaggctatcaaaaagccctaataatacagca
ctgcttattgagggttcatcgcgagatatcgccgcttatggtattactcgagaggctgta
atgggtgcgctatgctctattgctatcaacttcaacatgcctatcttacgcagtttatct
caggcagagtcggctaaaatcctctacttctgtgccactcaattaaatagctgggaaaca
ggagtcatctccaacggcagaaaacctaaacgtcacaaaaaccgacaactcttcatactc
caaagtcttcctcaagttggtccaaaactggctaaacgtttattaatacatttcgagagt
attgaagcggtcttcactgcccctgaagaggaactgttaaaggtagaggggatcgggcaa
gagaaggctagagggatacgaggaatattaacgtcaacgaacaaaagaggccacaaccaa
cccgattaa

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