Shewanella halifaxensis: Shal_0469
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Entry
Shal_0469 CDS
T00654
Name
(GenBank) type II secretion system protein
KO
K02653
type IV pilus assembly protein PilC
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
shl02044
]
Shal_0469
02035 Bacterial motility proteins [BR:
shl02035
]
Shal_0469
Secretion system [BR:
shl02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Shal_0469
Bacterial motility proteins [BR:
shl02035
]
Pilus system
Pilus assembly proteins
Shal_0469
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
DUF996
ARMH3_C
Motif
Other DBs
NCBI-ProteinID:
ABZ75044
UniProt:
B0TQQ1
LinkDB
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Position
complement(555448..556710)
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AA seq
420 aa
AA seq
DB search
MATATMKTKKPSAKKTKNQPKVLTFQWKGTNRDGAKTSGELRGVSSAEIRAQLKAQGVVP
KNVRKKSAPLFKSEKKIKPMDIAMMTRQIATMLAAGVPIVTTLELLGKGHEKAKMRELLA
TIVNDVQSGIPLSDSLRPHRKYFDDLYVDLVAAGEHSGSLDAVFDRIATYREKSEALKSK
IKKAMFYPAAVVIVAIMVTALLLLFVVPQFEDIFNGFGAELPAFTQFIISISRWLQASWY
IFVIAIIVGIWSFRRAHLNSQKFRDRVDEFVLKIPAIGDILHKGAMARFARTLATTFAAG
VPLIDGLESAAGASGNAVYRKAILKIRTEVMSGMQMNVAMRTTGLFPDMLIQMVMIGEES
GSLDNMLNKVANIYEMQVDDAVDGLSSLIEPVMMVVIGTVVGGLIVGMYLPIFEMGNVVG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcaacaatgaaaactaaaaagcccagtgccaagaaaacaaaaaaccaaccc
aaagtcctcacctttcagtggaaaggcaccaatcgcgatggcgctaaaacatctggcgag
ctaagaggcgtatcgagcgccgagatccgtgcacaacttaaagctcaaggtgtcgttcca
aaaaacgttcgtaaaaagtcggcaccgctgtttaagtcagagaaaaaaatcaaacccatg
gatatcgccatgatgactcgccagatagccaccatgctggctgcaggcgtacctattgtg
acgactctcgagctgcttggtaaaggccatgaaaaagccaagatgcgagaactacttgcc
accatcgtcaacgatgtacaatcgggcatacctctctctgactctttaagaccccataga
aaatattttgatgatctctatgtcgatctggtcgcagcgggtgaacactccggctcactg
gatgcggtatttgacagaattgcgacttaccgagaaaaatctgaggcactaaaatcaaaa
attaagaaggcgatgttctaccccgccgccgtggttatcgtcgctattatggtaacagcc
ttactgctgctatttgtcgttccccagtttgaggatatttttaacggctttggcgcagaa
ctccctgcatttacacaattcatcattagcatatctcgctggctacaggcttcttggtac
atctttgtgatcgccattatcgttggcatttggagctttaggcgcgcgcaccttaattca
caaaaattcagggatagggtggatgagtttgtactaaaaatacctgccatcggcgatatc
ttgcacaaaggcgccatggcacgtttcgctcgcaccctagcaaccacctttgccgctggt
gtgccgttaatcgatggtctagagtcggcagcaggcgcatcgggtaatgcggtctatcgt
aaagctattttaaaaattcgcaccgaagtgatgtcgggcatgcagatgaatgtcgccatg
cgcaccacggggttgtttcccgacatgctgatccagatggtgatgatcggtgaagagtcg
ggatcacttgataatatgctcaataaagtcgctaatatctacgaaatgcaggtcgatgat
gccgtcgatggcttatcaagcctaatcgagcccgttatgatggtggttatcggtaccgtg
gtaggcggccttattgtgggtatgtacctacctattttcgaaatgggtaatgtagtagga
tga
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