Shewanella halifaxensis: Shal_0498
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Entry
Shal_0498 CDS
T00654
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
shl03012
]
Shal_0498
Translation factors [BR:
shl03012
]
Eukaryotic type
Elongation factors
Shal_0498
Prokaryotic type
Shal_0498
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_3rd_SelB
WHD_1st_3rd_SelB
WHD_2nd_SelB_bact
MMR_HSR1
GTP_EFTU_D2
WHD_2nd_SelB
FeoB_N
SRPRB
PduV-EutP
GTP_EFTU_D4
Motif
Other DBs
NCBI-ProteinID:
ABZ75073
UniProt:
B0TRA1
LinkDB
All DBs
Position
600008..601924
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AA seq
638 aa
AA seq
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MIIVTSGHVDHGKTSLIQALTGTDADRLPEEKQRGMTIELGYAFMDLADDKRLAFVDVPG
HSKFINTMLAGVSCAKHALLIIACDDGVMPQTHEHLAILQLLNLEHLIVVLTKQDKVDSE
RVEIVKLEVSELLAHHHRQSVIYVVSAQTGFGITELSLAIKLLAEAQTKTLNQLSVESSF
RMAIDRAFSVKGAGLVVTGTVISGQVSQGQSLYLSGQRKAVKVRSLHSQGRVTDKAHHCQ
RVALNLTGVDQHRGAQRGDWLTALEPAVAVIEAPKVICGVFESSSSFKHWQAVQVHLGNS
HTTARLGLLQSLADGKALVELQCEQSLHCVEQDRIIVRDSAAKTTLGALRVLDINPPKRG
KRSPERLAYIEALKECSSVKRSLQVQTQDHCVKKSDFMWANQLTDQARLLADEQLLELDG
YLLSHTLKQQIETQLLTLVEDYHQASPELLGLSINRLQRMTHGKYPLAVLLKLTDSLREQ
QLLQSTRGLLHLPRHSLSLSEQEQQQWLSIKQLMLAANGPLWSSDLAKELNLELTVVRLL
CRKLIQLGYLSAIIKDRFMLTESLYFYADVIRQQINVCGEIKTADFNSIIKLGRKASIQL
LEFYDRSGLTWRKRKDNSRVIRDSSIFISSDLAEEHRS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtcacctctggccatgtagatcacggcaaaacaagtttaattcaagcacta
accggtacagatgccgaccgcttaccggaagagaaacagcgtggcatgaccatagaattg
ggctatgcctttatggatttggcggatgataaacgtctggcctttgtcgatgtgccgggc
cacagtaagtttatcaataccatgctcgcaggagtgagctgcgccaagcatgcgctattg
attatcgcctgtgatgacggcgtgatgccgcaaacccatgagcatttagccatcttacag
ctgcttaatcttgagcacttaatcgtggtgctgaccaagcaagataaggttgacagcgaa
cgcgttgagattgtcaaacttgaggtgagtgaactactcgcgcaccatcacaggcagagt
gttatttatgtggtgtcagcgcagacaggctttggcattactgagcttagccttgccatt
aaactgctggccgaagcccaaacaaaaacgctgaatcagttaagtgtagagtctagcttt
cgcatggcgatcgaccgagcctttagcgttaaaggtgcaggccttgtcgtcaccggcacc
gtgattagtgggcaggtgagtcaggggcaaagtctatatctttcagggcagcgtaaagcg
gtaaaagtcagaagcctacatagccaaggtcgtgtcactgataaggcgcatcattgtcag
cgcgtggcgcttaacttaaccggagtagaccaacatcggggcgcccagcgcggcgattgg
ctaacggcacttgagcctgctgttgcagttattgaagcgcctaaggtgatttgcggtgtg
ttcgaatccagctcttcatttaagcactggcaagctgtgcaagtgcacttaggtaatagc
cacaccacggctcgtcttgggttattgcagagccttgccgacggcaaagccttggtggaa
cttcagtgtgagcagtcacttcattgcgtggaacaagaccgaatcattgtgcgtgatagt
gcggctaagaccactctaggtgcgctgcgagtgttagatattaatccgccaaaacgaggc
aagcgtagtcctgaacgtttggcttatatagaggcactaaaagagtgcagctcagttaag
cgcagcttgcaagttcaaacacaagatcactgcgtgaagaagtctgacttcatgtgggcc
aatcagctaacggatcaggctcggctattagccgatgaacagctactagagcttgatggc
tacctgctatctcacacattaaagcagcagattgagactcagctattaaccctagtggaa
gactaccatcaggcatctccagaactgcttggactaagcattaaccgcctacagcgcatg
actcatggaaaatatcctttggctgtactgctcaagcttacggatagtctgcgtgagcag
caactgctgcagagcacccgcggcctgttgcacctaccgaggcacagcttaagcttatcg
gagcaagagcaacagcagtggctcagcattaaacagttgatgttggcagcaaatggtcct
ttgtggtcatctgatctggctaaggaacttaaccttgagctaactgttgtgcggttactt
tgccgtaagttgattcaattaggttacttatccgccattattaaagaccgctttatgtta
accgaaagtctttatttttacgccgatgttatcagacaacaaattaatgtttgtggcgaa
ataaaaaccgccgattttaattcgattattaagctaggcagaaaagccagtattcaactt
ttagagttttatgaccgcagtggattaacgtggcgaaagcgaaaggataattcgagggtc
ataagagacagtagcatctttatatcgagtgatttggcggaagaacataggagttga
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