Shewanella halifaxensis: Shal_0662
Help
Entry
Shal_0662 CDS
T00654
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
shl
Shewanella halifaxensis
Pathway
shl00630
Glyoxylate and dicarboxylate metabolism
shl00680
Methane metabolism
shl01100
Metabolic pathways
shl01120
Microbial metabolism in diverse environments
shl01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Shal_0662
09102 Energy metabolism
00680 Methane metabolism
Shal_0662
Enzymes [BR:
shl01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Shal_0662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Pyr_redox_2
Fer4_20
Pyr_redox
Molybdop_Fe4S4
Fer4_7
NAD_binding_8
Pyr_redox_3
DAO
Fer4
Fer2_4
Fer4_6
HI0933_like
NAD_binding_7
FAD_binding_2
FAD_oxidored
Fer4_16
Fer4_8
FAD_binding_3
GIDA
Fer4_18
AlaDh_PNT_C
Fer4_9
Fer4_2
Fer4_10
Fer4_21
Lys_Orn_oxgnase
2-Hacid_dh_C
Amino_oxidase
NADH-G_4Fe-4S_3
Fer4_4
Thi4
Fer4_Nqo3
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
ABZ75237
UniProt:
B0TSR2
LinkDB
All DBs
Position
811033..815406
Genome browser
AA seq
1457 aa
AA seq
DB search
MKNIIINGNQLTVSPEATLFDIAKKAGITIPNLCHQHNDTGFSTKSTEKSHCNLCQVEVR
ISGNSKHNESVTVRACDTQLNSLYSADEQTIEIITQSAHLSLLRQAALTEILSDHFADCE
APCQQACPAGVDVQSYLFHIAQGNHREAIKVIKQMLPLPLSIGRVCPAFCEVECRRGLVD
EPVAIRQLKRHAADLDLNDSQSYIPPRAPATGKKVAIIGSGPAGISAGYFLSNAGHEVTI
YEMMPKAGGWLRYGIPEYRLPKAILDKEIDLLCQNGLNIETNVRLGHELHLPQLVENFDA
VCLAIGAQKAVPMNYLGSDLKGCYLGVDYLKDHCLDKRFTTGKRVAVIGGGNTAIDCART
AKREGADVTLIYRRTKEEMPAEDYEIVEAEHEGVNFHFLTNPIENHSDEQGRVKSVTFEI
MALGEPDSSGRRAPVATGETFTEDFDTVIPAVSQMPDMDFLNHPQSQLSTGKLALTRWNT
FEGCDHTMSAGHSSGTEKLFVLGDSRTGPATAVAAVADGRKAAIAIDKLLNQGLTCELTK
FKFNATKASKTASLSSALYPHTKVEAKAKMPELSLLHRMGGFSEVELGFATDEAMKEAAR
CLECACQANTDCKLRDYATEYKVDSKSLVPQSPVDAPRQFSVDDSSPFITFDANRCISCG
ACVDICHNKCGHSAISFESENHYQVLPDSSLSPERRAPRVGFNVTMRDSDCVQCGSCIQV
CPTGALVDARNKTQGVTDELTQVSTVCTYCGIGCRLIMHVDTANNTLKHISGDGNSPVNE
GMLCVKGRFGFDFIGSEQRLTQPLIRKNGQLIPVSWDEAIDYVGDKLGSIIATHGGDAVA
GLASAKATNEDNYVFQKLFRSIIGTNNIDHCARLCHASTVTGLYDVLGSGAMTNDIPNIK
ESDLIFILGSDTSNAHPIIASKIKQAITEHGARLVVADPKRVDISDHAELYMCHKPGTDV
MLINAMMQQIIKHNWHDKAYLEARVDGFEALYSEVMKEKYSLENAQLITGVDATEIATLA
KMIGTAKKTAVYYAMGITQHTSGHDNVTAIANLQLLCGNIGIRGAGINPLRGQSNVQGAC
DMGALPNYFTGYQKVDDPAVQRRFKQAWDCETLPNKIGLAATEVMHALMKGKLKALYVMG
ENPALSDPDQTHVIEALKEAELLIVQDIFLTETAAMAHVVLPALSFAEKIGHFTNTERRV
QQLQVAVKPPGLAKLDWKIVQSIANALGGSWDYTDEKQIWHEITQVTPQYRGISWETMDP
NSDKGIAGLQWPCPEVGHPGTPILHMKEFTRGRAQMRAMDYRLPAEPPCSEYSLTLSTGR
LLEQFHTGTLTRKTAGLDELGKPRVMISVYDAEKLGIANGDMLQITSRRGEIEIAAFVTK
RAQAGVLFLPFHFAEAAANKLTINALDPVAKIPEFKICAIKVAKVEVNKTENISTLEVAK
VAKARAETETEHDMEVS
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatattataattaatggtaatcaactcacagttagtcccgaagcaaccttgttc
gacattgcaaaaaaagcggggatcactattcctaacctatgtcatcaacataatgacact
ggtttttccacaaagagtacagagaaaagccactgtaacttgtgtcaggtggaagtacgc
atttcaggaaatagcaaacacaatgagtccgtgaccgtccgggcttgtgatacccagctc
aactctctctattcagcggatgaacagacaatagagattatcactcaatctgctcatctg
agtttactaagacaagcggcactgaccgaaattctaagcgaccattttgccgactgcgaa
gcaccttgccaacaagcctgtcctgctggcgtcgatgtgcaatcttatcttttccatatc
gcacaaggtaaccatagagaagcaattaaggtgattaagcaaatgctgccactgcctctc
tcgatagggcgagtttgcccggcattttgtgaggtagagtgtcgtcggggcttagtcgat
gagcccgttgccattaggcaactgaaacgccacgctgccgatctcgaccttaatgatagc
cagagctatataccgccaagagcgcctgctacaggtaagaaagtggctattataggcagc
ggacctgcaggcattagtgccggatattttctatcaaacgcaggccatgaagttaccatt
tatgaaatgatgccaaaggcggggggctggctacgatatgggatcccagagtatcgccta
ccaaaggccatactcgataaagagatagacctgctctgccaaaatggcttaaacattgaa
accaatgtgagattaggccatgagctccatctcccgcaactggtagaaaacttcgacgcg
gtttgtctcgccatcggtgcgcaaaaagcggtaccgatgaactacctaggctcagatctc
aaggggtgctacttaggcgtcgattaccttaaagatcactgtctggataagagatttacc
accggcaaacgagtggctgttatcggcggaggtaatacggccatcgattgtgcccgcacc
gccaagcgtgaaggtgccgacgtcaccttgatctatcgccgtaccaaggaggagatgcct
gcagaagattatgaaatagtcgaagctgagcacgaaggcgttaacttccatttccttacc
aatccgattgaaaatcacagtgatgagcaaggccgcgttaagagtgtaacttttgagata
atggctcttggtgagccagatagttcaggcagacgcgctccggtagcgacaggtgaaacc
ttcactgaagattttgataccgtgatccccgccgtgtctcagatgccggatatggatttt
cttaaccatccacaaagtcagttatcaacgggcaagcttgccctcactcgctggaataca
ttcgagggatgcgaccacaccatgtctgcgggtcactcatcaggcactgaaaaactgttt
gttcttggcgattcgcgaacaggccctgccactgcagttgccgctgtcgccgatggacgc
aaagccgctattgccatagataagttgctcaaccaaggcctgacctgtgaattgactaaa
tttaagttcaatgccaccaaggcgagtaagacagcctcactgtcatcggccttataccct
cataccaaggttgaagctaaggccaaaatgcctgagcttagcctgttacaccgaatgggg
ggatttagcgaagttgagctaggatttgcaaccgacgaagccatgaaagaggccgcgcgt
tgccttgagtgtgcctgtcaggccaataccgattgtaagctgcgcgattacgccactgaa
tataaagtcgacagtaaatcactcgtacctcaaagccctgtagatgcgccgcgtcagttt
agtgtcgatgactctagtccttttatcacttttgatgctaatcgctgtattagttgtggc
gcttgtgtcgatatctgtcataacaagtgcggccatagtgccattagcttcgagtccgaa
aaccactatcaggtattaccagactcaagcttgtcaccagagcgccgcgcaccacgtgtt
ggctttaatgtcaccatgagagacagtgattgcgtccagtgtggtagctgcatacaagtg
tgtccaactggcgcacttgtcgatgctagaaacaagactcagggcgtgaccgatgaatta
actcaggtatcgaccgtctgtacttactgtggaataggttgccgcctgatcatgcatgtg
gatacggcaaataacaccctcaagcacatcagcggtgatggtaactctccggttaatgaa
ggcatgttatgcgttaaaggtcgctttggctttgattttattggtagtgagcaaagacta
acacagccacttattcgtaaaaatggccagttaatcccagtatcttgggatgaagccatc
gattatgttggtgataaactcggtagcatcatcgctacccatggcggcgatgccgtcgct
ggactcgcctctgccaaggcgaccaacgaagataactatgtttttcaaaagctgtttaga
agcattatcggcaccaacaatatcgaccactgcgcccgtctttgtcacgcatcgaccgta
acaggcctatatgacgtgctcggtagcggtgccatgaccaatgatattcccaatattaaa
gaatcggatctaatctttatcctcggatctgacaccagcaatgctcatccgattatagcc
tcgaagatcaagcaggcgatcaccgaacatggtgcgcgtttggtggttgccgatcctaag
cgcgtcgatatatccgatcacgccgagctctatatgtgccacaagccgggcaccgatgtg
atgttaatcaatgccatgatgcagcagataattaagcataactggcatgataaagcgtac
cttgaagctagagtcgatggttttgaagcgctctacagcgaggtcatgaaggagaaatac
tcgttagagaatgcgcaactcatcaccggagtcgatgcgactgaaatagccaccttggcc
aagatgataggcactgccaagaaaaccgctgtctactacgccatgggcataactcaacac
acctcgggccatgacaacgtcaccgccattgccaacttgcaactcttgtgtggcaatatc
ggcattcgcggcgcaggtatcaatccacttcgcggccagagtaatgttcaaggtgcctgt
gatatgggggctctacctaattatttcacgggctaccaaaaggtcgacgaccctgcggtg
cagcgacgcttcaagcaagcttgggattgtgagacgttgccaaacaaaataggcttagcc
gccactgaagtgatgcatgcactgatgaagggcaagctcaaagcgctctatgttatgggg
gagaacccagcgttaagcgatcccgatcaaacccatgtgatcgaagcgctgaaagaggct
gagctattaatcgttcaggatattttcttaactgaaacggccgccatggctcatgtggtc
ttgccggcactgtcattcgccgaaaaaatcggccacttcaccaacaccgagcgccgcgta
cagcagctccaagtcgctgtaaagccgccaggacttgccaagctcgactggaagatagtg
cagagcatcgccaatgcattgggggggagctgggactatacggatgagaagcagatttgg
catgagataacccaagtaacgccacaatatcgcggtattagctgggaaactatggatcca
aacagtgacaaaggtatcgcaggtttgcagtggccttgtccagaggttggtcatccaggc
acgccgatattgcatatgaaagagtttactcgaggtcgcgcccagatgagagcgatggac
tatcgattgcctgccgaaccgccttgtagtgagtactcgctaaccttgtcgactggacgc
ttgctggaacagtttcacactggaaccctgacccgcaaaacggctggactcgatgagttg
ggtaaaccacgggtgatgatctcagtctatgacgccgagaagcttggcatcgctaatggc
gatatgctgcagatcacctctcgccgcggtgagattgagatcgccgcattcgtcactaag
cgtgctcaagctggcgtcttgttcctgccgttccactttgccgaggccgcagccaataag
ctcaccatcaatgcgctcgatcctgtcgctaagatccccgagtttaagatctgcgccatt
aaagtcgcaaaggttgaagtcaataagactgaaaatatatccacacttgaagtcgcaaag
gtggctaaggctagagctgagacagagacagagcatgatatggaagtgagttaa
DBGET
integrated database retrieval system
