Shewanella halifaxensis: Shal_0752
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Entry
Shal_0752 CDS
T00654
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
shl
Shewanella halifaxensis
Pathway
shl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Shal_0752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shl03019
]
Shal_0752
Enzymes [BR:
shl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Shal_0752
Messenger RNA biogenesis [BR:
shl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Shal_0752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
ABZ75327
UniProt:
B0TTI4
LinkDB
All DBs
Position
complement(932182..933474)
Genome browser
AA seq
430 aa
AA seq
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MPRNAHAISRRQISDNAIKVLYRLHKSGFKAYLVGGGVRDILLGLQPKDFDVVTNATPEE
IKRLFRNCRLVGRRFRLAHIVFGRDVIEVATLRGHHVDSEEKISKTNESGRLLRDNVYGS
IDEDAERRDFTVNALYYDISDFSIHSYGGGLQDLESRTIRLIGDPETRYREDPVRMLRAV
RFATKLDMTIEANAAKPIKGLARLLKDIPAARMYEEVLKLFFAGKALENFHMMREFGLFE
PLFPQVEALLKEYPSGETAKLLQEMMTSTDERVAQDKPVTPAFFYAALLWYPLSQRADDI
ALESGLSTYDAYTAAMGDVMEQQCRTISIPRRFSTVTKDIWQLQLRFERNKGTKAFRFIE
HPKFRAAYDLLLLRGHAEGGATAKNAAWWKSFVEGNEDQRNVIARSANKGGRNRNTNQRR
RRKPSTKPAE
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
gtgcctagaaatgcgcacgctatttctcgcagacagatcagtgacaatgcgatcaaagta
ctctatagactgcacaagtcaggcttcaaagcctacttggtaggcggtggtgtacgcgat
attttattgggcttacaaccgaaagacttcgacgttgttaccaatgccacccctgaagag
attaaacgactattccgtaactgccgtttagttggtcgtcgcttccgcctcgctcatatc
gtttttgggcgcgatgtgattgaagttgcgactttacgcggccatcacgtagatagcgaa
gagaagatctctaagaccaatgagtctggccgtctattgcgcgacaacgtctacggcagt
atcgatgaagacgccgagcgtcgtgactttaccgttaacgccctatattacgacatcagt
gatttctctattcatagctacggcggtgggttacaagatctagagtctcgtacaatccgt
ttaattggcgacccagagactcgctatcgtgaagatcctgtgcgtatgctacgtgcagtg
cgtttcgcgactaagctggatatgaccattgaagcgaatgccgcaaaaccgattaaaggt
ttagcgcgattgcttaaagatattcctgctgctcgtatgtatgaagaagtactgaagctg
tttttcgccgggaaagcacttgaaaacttccatatgatgcgcgagtttggactatttgaa
ccgctattccctcaggttgaagcactgttaaaagaatatccaagcggtgaaaccgctaag
ttattgcaagagatgatgacaagtaccgatgagcgcgtcgcacaagacaagccggttacc
ccagcatttttctatgcagcgctgctttggtacccactaagtcagcgtgctgacgatatc
gccctagaaagcggtctatcaacctatgacgcttacactgcggccatgggtgatgtcatg
gagcagcaatgccgcaccattagcataccgcgccgctttagcactgtgaccaaagatatt
tggcagctacaacttaggttcgaacgtaacaagggcaccaaggcatttagattcattgag
catcctaagtttagagccgcttatgatctactcttgctacgtggccatgccgaaggtggt
gctaccgcgaagaatgccgcatggtggaagagctttgttgaaggcaatgaagatcagcgt
aatgtgattgcacgctcagccaataaagggggtcgtaaccgtaacactaatcaacgtcga
cgccgcaagcctagcaccaaacctgcagaataa
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