Shewanella halifaxensis: Shal_0790
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Entry
Shal_0790 CDS
T00654
Name
(GenBank) transcriptional regulator, AsnC family
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shl03000
]
Shal_0790
Transcription factors [BR:
shl03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
Shal_0790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
NirdL-like_HTH
HTH_11
MarR_2
HTH_20
HTH_5
HTH_IclR
HTH_34
HTH_Tnp_4
Mga
B-block_TFIIIC
DUF4080
MarR
Sigma70_r4
Clp_N
HTH_38
TrmB
HTH_Crp_2
HemN_C
Motif
Other DBs
NCBI-ProteinID:
ABZ75365
UniProt:
B0TTM2
LinkDB
All DBs
Position
complement(986773..987234)
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AA seq
153 aa
AA seq
DB search
MEAPFQRDSLDNQILSALMKEARTPFAELAKRFGVSAGTIHVRVEKMKQAGIITGAQITV
NPKALGYDVCCFIGINLKSAGDYPAAISKLNALEEVVEAYYTTGNYSVFVKVMCQSIDGL
QHVLINRIQSIDEIQSTETLISLQNPIVRAVKP
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atggaagccccatttcaaagagactcactcgacaatcaaattttgtcggcattaatgaaa
gaagcaagaacgcccttcgccgaattggctaaacgttttggagtgagtgctggcaccatc
catgttcgcgtcgaaaaaatgaagcaagcagggatcatcacaggggcgcagatcaccgtt
aaccctaaagccttaggttacgatgtatgctgttttatcggcattaatttaaagagtgcc
ggagactatcctgcagccatatctaaactcaatgcacttgaagaggtggttgaggcctat
tacaccacaggtaactacagtgtttttgtaaaggtcatgtgtcagtctatcgatggactg
cagcatgtattgattaatcgtattcagtctatcgatgagatccaatcgaccgaaacactg
attagtttacaaaaccccatcgtacgggcggttaagccttag
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integrated database retrieval system
