Shewanella halifaxensis: Shal_0953
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Entry
Shal_0953 CDS
T00654
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
shl
Shewanella halifaxensis
Pathway
shl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Shal_0953
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shl01007
]
Shal_0953
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shl03016
]
Shal_0953
Enzymes [BR:
shl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
Shal_0953
Amino acid related enzymes [BR:
shl01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Shal_0953
Transfer RNA biogenesis [BR:
shl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Shal_0953
Prokaryotic type
Shal_0953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
ABZ75528
UniProt:
B0TV90
LinkDB
All DBs
Position
complement(1173014..1175929)
Genome browser
AA seq
971 aa
AA seq
DB search
MEKTYNPQSIEQSLYQNWEEKGYFKPHGDESQGNYCIMIPPPNVTGSLHMGHAFQDTIMD
TLTRYQRMKGKNTLWQVGTDHAGIATQMLVERKVAAEEGLSRHDLGRENFIDRIWDWKEQ
SGGTITKQLRRLGASVDWDRERFTMDEGMSEAVQEVFVRLYEDDLIYRGKRLVNWDPALH
TAISDLEVENKEKQGSMWHFRYPLADGALTADGKDYLEVATTRPETMLGDSAVAVHPDDE
RYQSLIGKFILLPIVNRLIPIVADDYVDIEFGTGCVKITPAHDFNDYEVGKRHALPMYNI
LTIDAAIRSSAEVVNTDGTANNDLDNSLPERYAGLDRFKARTAIVEEFETLGLLGKIDPH
GLKVPYGDRSGVVIEPLLTDQWYVAVAPMAKTAMEAVENGDIKFVPQQYENMYNSWMRDI
QDWCISRQLWWGHRIPAWYDEAGKVYVGRDEAEVRAKHKLDDSVVLRQDADVLDTWFSSA
LWTFSTLGWPEDTAELKAFHPTDVLVTGFDIIFFWVARMIMMTMHFIKDENGKPQVPFKT
VYVTGLIRDEAGNKMSKSKGNVLDPLDMIDGIDLESLVTKRTGNMMQPQLAAKIEKSTRK
EFSDGIEPHGTDALRFTLASMASTGRDINWDMKRLDGYRSFCNKIWNASRYVLMNTEVQV
EGASDDAIGEALDCGQILVDGKPGEMELSIADRWIIGLFNETVKAYDEHMANYRFDLAAN
TIYEFTWNQFCDWYLELTKPVMQSGTEAQLRGTRHTLVNVLEQMQRLMHPMMPYLTETIW
KRVQPLAGVEGDTLMLAAFPEYQADKVDAVAMEDLEWVKQVITAVRNIRAELNIAPSKPL
NALLRGVSYKDRARLEANQIFFTTLAKLETITIMSEDDVAPMSTTQLIGDMELLIPMAGL
IDVAKEVARIDKLLEKAAAEFARIEGKLSNQGFVAKAPAAVIEKERAKQAEYQRDMDKLT
EQKAELAKLEG
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaacatataacccgcagtctatagaacagtctctttaccaaaactgggaagag
aaaggttacttcaagccacacggcgatgagtctcaaggcaactattgcatcatgatcccg
ccaccaaacgtgacgggcagcttgcacatgggccacgccttccaagataccatcatggat
acgttaacccgttaccagcgcatgaagggtaagaacaccctttggcaggtcggtactgac
cacgcgggtattgccacacagatgctggttgagcgtaaagtagcagcggaagaagggcta
agccgccacgatcttggccgtgaaaacttcatcgaccgtatctgggactggaaagagcaa
tctggtggcactatcactaagcagctacgtcgtcttggcgcatctgtagattgggatcgt
gagcgtttcaccatggacgaaggcatgtctgaagcggtacaagaagtgtttgtacgcttg
tacgaagatgaccttatctaccgtggtaagcgcctagtgaactgggatccagccctgcac
actgctatctctgacttagaagttgagaacaaagaaaagcaaggcagcatgtggcacttc
cgctatccacttgccgatggtgctctaacagccgatggtaaagattacctagaagtggcc
actacgcgtcctgaaaccatgctaggtgacagtgcagttgcggttcatcctgacgatgag
cgctaccaatctttgattggtaaattcattttattgccaatcgtaaaccgtcttatccca
atcgttgctgacgattatgttgatattgaattcggtacaggttgtgtgaaaatcacccca
gcgcatgactttaacgactatgaagtcggtaagcgtcacgcattgcctatgtacaacatc
ttaactatcgacgcggcaattcgttcaagcgccgaagtggttaacaccgatggtactgca
aacaacgacctagataatagcctacctgagcgttacgccggtcttgatcgcttcaaggcg
cgtaccgccattgttgaagagtttgaaaccttaggcctacttggcaaaatcgatccacac
ggattgaaagtaccttacggtgatcgctctggtgtagtaatcgagccattactaacagac
cagtggtatgttgccgtagcacctatggcaaagactgcgatggaagccgttgaaaacggt
gacatcaagtttgtacctcagcagtacgaaaacatgtacaactcttggatgcgcgacatt
caagactggtgtatttcacgtcagctttggtggggtcaccgtatcccagcttggtacgac
gaagccggtaaagtttatgttggccgtgatgaagcggaagtgcgtgctaaacacaagctt
gacgattcagtggtacttcgccaagacgccgatgtactcgatacttggttcagctctgca
ttgtggactttctcgacactaggctggcctgaagatactgctgagcttaaagccttccac
ccaactgatgtgttggtaactggttttgacatcatcttcttctgggttgcccgcatgatc
atgatgaccatgcatttcatcaaagatgaaaacggtaagccacaagtgccgttcaagacg
gtatacgtgacaggtcttatccgtgatgaagcgggtaacaagatgtctaagtctaagggc
aacgtacttgacccactagacatgattgacggtatcgatcttgagtcactagtgactaag
cgtactggcaacatgatgcagccacagcttgccgctaagattgaaaagagcactcgtaaa
gagtttagcgatggcattgaaccacacggcactgacgcactacgctttactttggcatct
atggcatcaactggccgtgatatcaactgggacatgaaacgcctagacggctaccgcagc
ttctgtaacaagatctggaacgcgtcacgctacgtgttaatgaacacagaagtgcaagtt
gaaggcgctagcgacgatgcaattggcgaagccttagattgcggtcaaattcttgttgac
ggcaagccgggcgagatggaactgtcgattgccgatcgctggattatcggtctgttcaat
gaaaccgttaaagcctatgacgagcacatggcgaactaccgtttcgacctagcggctaac
actatttacgagttcacttggaaccagttctgtgattggtacttagagctaactaagcca
gtgatgcaaagcggcactgaagctcagcttcgtggtacacgccatacgttggttaacgtg
cttgagcagatgcagcgtctgatgcacccaatgatgccttatctaacagagactatctgg
aagcgcgttcagccattagcaggtgttgagggtgacacattgatgttggccgccttccca
gagtatcaagctgataaagttgatgctgtggcaatggaagatctagagtgggttaagcaa
gtgatcactgcggtacgtaacatccgcgccgagcttaacatcgcgccatctaagccgctt
aatgcattgctacgtggcgtgagctacaaagacagagcacgtcttgaagcgaaccagata
ttcttcactacactggcaaaacttgagacgatcaccattatgtctgaagatgatgttgcg
ccgatgtcgaccacacagctgattggcgatatggagctgttgatcccaatggcaggcctt
atcgatgtggctaaagaagtcgcccgtatcgacaaattactcgagaaagcggcagctgaa
tttgcgcgtatcgaaggtaagctatctaaccaaggtttcgttgctaaagctcctgctgcc
gtaattgaaaaagagcgtgctaagcaagctgaataccagcgcgatatggacaagctaact
gagcaaaaagctgagctggctaagttagaaggttaa
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