Shewanella halifaxensis: Shal_1005
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Entry
Shal_1005 CDS
T00654
Name
(GenBank) DNA primase
KO
K02316
DNA primase [EC:
2.7.7.101
]
Organism
shl
Shewanella halifaxensis
Pathway
shl03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Shal_1005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shl03032
]
Shal_1005
Enzymes [BR:
shl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.101 DNA primase DnaG
Shal_1005
DNA replication proteins [BR:
shl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Shal_1005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNAG_N
Zn_ribbon_DnaG
DnaG_DnaB_bind
Toprim_2
Toprim
Toprim_4
Toprim_3
DnaB_bind
NEMO
Motif
Other DBs
NCBI-ProteinID:
ABZ75579
UniProt:
B0TIN4
LinkDB
All DBs
Position
complement(1236663..1238393)
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AA seq
576 aa
AA seq
DB search
MAIPRDFINELVARTDIVDLIDPKVPLKKAGKNHSACCPFHSEKSPSFTVSRDKQFYHCF
GCGAHGNAIDFVMEYDRLDFVDAIEELAGQLGLEVPREQGTGKPRDQELSRDLYQLMEEA
SLFFQSQLRQHTDKQKVLDYLKHRGLSKEVVEHFNIGFAPDGWDGLLSRYRQNQDSQDKL
LTAGMVIENDSGKRYDRFRDRLMFPIRDRRGRVIGFGGRVLGDGTPKYLNSPETPIFHKG
NELYGLYELKQRHREPQRVLIVEGYMDVVALAQFDVDYAVASLGTSTTAEQFQLLLRSAK
EVICCYDGDKAGKEAAWRALETALPLLKPGNQVRFMFLPEGEDPDTLVRQIGKQEFEAQI
DQAMALPEFLFENLIKTYGNEDKSVLAKNAIKLIEKVQDTVLQSLLLEDLAHKLRMNGAD
ELKRKFNFSTKAAEKPNQHKALKGRGTPLRLAIALLVQHPHLGEKLPEQPALKHIQMAGI
DLLTLVLDLTRGQVITSAQLLEQFRGDNQFSTLKKLTQWDHQVADENLLQKLKETLVWLN
NQYLEQRYQELSMKKNLTKEERLQLSKLISVIKNKA
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcgatacctcgtgattttataaatgagctagtagctcgcactgatattgtcgatctc
atcgaccctaaagtgcccctaaaaaaggcgggtaaaaaccactctgcctgttgtcctttt
catagcgaaaaatctccctcttttactgtcagcagagacaaacagttttatcattgtttt
ggctgcggagcacacggcaacgctatcgattttgtcatggaatatgaccgactcgacttt
gttgatgctattgaagaactcgccggacaacttggactcgaagtcccaagggaacaaggc
actggcaaaccacgcgatcaagagctgagtcgcgacttatatcagttgatggaagaggct
agcctgttctttcaaagccaacttaggcaacatacagacaaacaaaaagtccttgattat
cttaaacatcgaggcctttcaaaagaagtggttgaacacttcaatatcggctttgcaccc
gatggctgggatggtctactaagccgttaccgccaaaaccaagactcgcaagataaactg
cttaccgcaggcatggtcatcgagaatgacagtggcaaacgctacgatagattccgcgac
cgtttaatgttcccaatcagggaccgacgcggacgagtgatcggctttggcggccgagtg
ttaggtgacggtacaccgaagtacttgaattcgccagaaacgcccatatttcataaaggc
aatgagctttatggtctatacgaattaaaacagcgtcaccgcgaaccgcaaagagtcttg
attgttgaaggctatatggatgttgtggcactggcacagtttgacgttgactacgctgtc
gcctcactcggtacctcgacaacggctgaacaatttcagttattactacgtagtgcaaaa
gaggtcatctgctgttatgacggtgacaaagcgggtaaagaagccgcatggcgagcgtta
gaaacagcattgccactactcaaacccggtaatcaggttcgatttatgttccttcctgag
ggggaagatcccgacaccttggttagacaaattggcaaacaagagtttgaagcgcaaatc
gaccaagctatggcgctacctgagtttttgtttgagaaccttataaaaacttacggcaat
gaagataagagtgttttggcaaaaaatgccattaaactcatagaaaaagtacaggacacc
gtattacagagcctgttactcgaagatttagcacataagctaagaatgaacggtgccgat
gaacttaagcgaaaatttaacttttcgactaaggcggccgaaaagccaaatcagcacaaa
gcgttgaaaggacgtggtacgcctctgcgattagccattgcattgctagtacaacatccg
catttgggtgaaaaactacccgaacaaccagcgctaaaacatatacagatggctggcatt
gatttgctaacccttgtattagatttaactcgcgggcaagtgataaccagcgcacaacta
cttgaacagttcaggggcgataaccaattcagcaccctaaaaaaactgacccaatgggat
catcaagtggcggatgaaaacttgctacaaaagttaaaagaaaccctcgtgtggttaaat
aaccagtatcttgaacaacgttatcaggaactgagtatgaagaagaatctcacgaaagaa
gagcggttacagcttagtaagctaatttcagtgattaaaaacaaggcttaa
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