Shewanella halifaxensis: Shal_1073
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Entry
Shal_1073 CDS
T00654
Name
(GenBank) transcriptional regulator, LysR family
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shl03000
]
Shal_1073
Transcription factors [BR:
shl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Shal_1073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
ABZ75642
UniProt:
B0TIU7
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All DBs
Position
1312740..1313648
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AA seq
302 aa
AA seq
DB search
MANLNYNHLYYFWMIQKKGSVAKAAEALCLTPQTVTGQIRVLETSLKGSLFKRVGRTLEP
TELGELVFRYADKMFSLSYEMLDLLNYQKDENILFEVGIAAALSKALASRVLLSVVPSDG
SMHLACYESTHEDLMTRLREHKLDMILSDCAGESLKYPEILSKQLGESGIAFFSAETYSK
PFPECLEQGKLLIPGRRSSLGQQLVRWFDEKGLNVSILGEFDDAAMMKSFGFFKQGIFVA
PSIYKQDILAHGMTLLGETSEIKEVYHVMFAERMIQHPAVKSLLETDFTELFAGNDLKVQ
QL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatctaaactacaatcatctctactatttttggatgatccaaaagaagggctct
gttgctaaagccgccgaggcattatgcttaactccgcaaacggttacgggtcaaattcgg
gtattagaaactagcctgaaaggcagcttatttaagcgggtcggccgcacattagaacct
actgagctcggtgaattggtatttcgttacgccgataagatgtttagcttaagctatgaa
atgttggatctgctgaattatcaaaaagatgagaacattttatttgaggtaggcattgcc
gcagccttgtcaaaagccttagccagtagagttttactttcggttgtgccgagtgatggc
tctatgcatttagcctgctatgaatcgactcacgaagacttgatgactaggttacgtgaa
cataagctggatatgatcctctcggattgtgcaggtgaaagtcttaagtatcctgagatc
ttatcaaagcaattgggggagtcaggtatagcgtttttctctgcagaaacttattcgaag
ccgttccctgaatgtttagagcaaggcaagttactaatccctggaagacgtagctctctt
ggtcaacagttagtgcgttggttcgacgagaaagggttgaatgtgagtattctcggtgag
tttgatgatgccgcgatgatgaaatcttttggttttttcaagcaggggatctttgttgct
ccttcgatttataagcaagatattttagcccatggtatgaccttacttggtgaaacatca
gaaattaaagaggtgtatcatgtgatgtttgccgagcggatgatccagcacccggcagtt
aagagcctgttagaaaccgactttaccgagctattcgctggtaacgatttaaaagtgcag
cagttgtag
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