Shewanella halifaxensis: Shal_1085
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Entry
Shal_1085 CDS
T00654
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
shl
Shewanella halifaxensis
Pathway
shl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Shal_1085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shl03400
]
Shal_1085
DNA repair and recombination proteins [BR:
shl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Shal_1085
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Shal_1085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
ABZ75654
UniProt:
B0TIV9
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All DBs
Position
1323718..1324473
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AA seq
251 aa
AA seq
DB search
MANRSYDVDHCFSLFCNRNEIIMERGYVLHSRHFRDSSVIVNLLVDGKGRVDAVARLGSA
KNSIRSILQPFQPLIFQLQGKSELKTLKQTEAASPAVPLTGDCLYSGLYLNELLIRCLSG
QHNAENLFFDYHRTLIAMATKFDQSQLRYFEHALLRELGTMPSLDFDPSDAPITASGCYR
LEQTHGFTPVITTEFNRHKYFSGEMLVALNQQTLTMEHYSEAKRLMRQLLAPILGDKPLH
SRSLFIKQTKT
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggccaatagatcttatgatgttgatcactgtttcagtttattttgcaatcggaatgag
atcatcatggagcgtggctacgttcttcacagcagacattttcgtgattcaagcgtaatc
gttaacttactggttgacggtaaaggccgtgtcgatgcagtggctcgccttggtagcgct
aaaaattcgattcgcagtatcttacagccttttcagccgttgatttttcagttgcaggga
aaatcggagcttaaaaccttaaaacaaaccgaagcagcaagtcctgcggtgccgttaacg
ggtgattgtttatattccggcctttatctaaatgaactcctgatccgctgcttaagcggg
cagcataatgctgagaacttattttttgattatcatcgcaccttaatagccatggctacg
aaatttgatcaaagtcagcttaggtactttgagcatgctctcttaagagagctaggcact
atgccatcgttagactttgaccctagcgatgctccaatcaccgccagtggctgttatcga
ttagagcaaacgcatggtttcacgcctgtgataacgacagagtttaatcgacacaagtat
ttttctggagaaatgttagtagcgttaaaccagcagacattaacgatggaacactatagt
gaagccaaaagattgatgcgtcagttgttagctccaatacttggcgataaaccactgcac
tcgagaagcttgtttattaagcaaaccaagacttaa
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