KEGG   Shewanella halifaxensis: Shal_1096
Entry
Shal_1096         CDS       T00654                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
shl  Shewanella halifaxensis
Pathway
shl02024  Quorum sensing
shl03060  Protein export
shl03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:shl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Shal_1096
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Shal_1096
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Shal_1096
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shl02044]
    Shal_1096
Enzymes [BR:shl01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Shal_1096
Secretion system [BR:shl02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Shal_1096
  Eukaryotic Sec-SRP protein
   Shal_1096
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 cobW KTI12 AAA_33 YqeC DnaB_C AAA_30 AAA_31 ABC_tran AAA_24 Helicase_RecD AAA_14 APS_kinase AAA_16 T2SSE TsaE Thymidylate_kin AAA_17 PIF1 TrwB_AAD_bind ArsA_ATPase ATP_bind_1 AAA_28 KAP_NTPase 6PF2K
Other DBs
NCBI-ProteinID: ABZ75665
UniProt: B0TJ74
LinkDB
Position
1334904..1336277
AA seq 457 aa
MFENLTDRLSRTLKNISGRGRLTEENVKETLREVRMALLEADVALPVVREFVNSVKERAV
GQEVSKSLSPGQAFIKIVQSELENAMGEANEALDLSAQPPAVIMMAGLQGAGKTTSVAKL
AKFLREREKKSVLVVSADVYRPAAIKQLETLAAEVEVQFFPSDVSQKPVDIAKAAIAHAK
LKFIDVVIVDTAGRLHVDEAMMDEIKELHAVINPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEAFHPDRVASRILGMGDV
LSLIEEVERGVDQEKAMKLAAKVKKGGNFDLEDFREQLQQMKNMGGMMNMIEKLPGVGQL
PPEALAQVQDGKMTGQMEAIINSMTAGERQRPDIIKGSRKRRIAMGSGTQIQDVNRLLKQ
FTQMQKMMKKMSSKGGMKKMMRGMSGMLPPGMKMPGR
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgtttgagaacttaactgacagattgtcacggactctgaaaaatatcagtggccgtggt
cgcttaacggaagaaaacgttaaggaaaccttacgcgaagtacgcatggcacttcttgag
gccgatgttgccttgcctgtggttcgtgaattcgtaaatagcgttaaagaacgcgctgtt
ggacaagaggtttctaagagtctaagtccaggccaagcctttattaagatcgttcaaagc
gaacttgaaaatgcgatgggcgaagcgaacgaagctttagacctatcggctcagccgcca
gctgttatcatgatggcaggtctgcaaggtgcgggtaaaaccaccagtgttgcaaagctt
gctaaattcttgcgtgaacgtgagaagaagtctgttctggttgtgtctgctgacgtttat
cgtcctgcggcgattaagcagctagaaaccttagcggcggaagttgaagttcagttcttc
ccgtcagacgtgagccaaaagccagttgatatcgccaaagcggcaattgctcatgctaag
ctaaaattcattgatgtggttattgtcgatactgcaggtcgtctgcacgtcgatgaagcc
atgatggatgaaattaaagagcttcatgccgtgattaacccggttgagacattgtttgtg
gttgatgccatgacaggtcaagatgcggcaaacacagcaaaggcctttaacgaagcctta
ccgttaacgggtgtggtactgacaaaagtcgatggtgacgcacgaggcggtgctgcgctt
tctatccgccacattaccggtaagccaattaaattcttaggtgtcggtgaaaagactgat
gcgttagaagcattccacccagatcgtgtcgcgtcacgcatccttggtatgggcgacgtt
ctttctcttattgaagaggttgagcgtggtgtagaccaagaaaaggcgatgaagcttgct
gctaaagtgaaaaaaggtggaaactttgatttagaagatttccgcgaacagctgcagcag
atgaagaacatgggcggcatgatgaacatgattgagaagctaccaggtgtgggtcaatta
ccacctgaagcacttgctcaagttcaagacggcaagatgacagggcagatggaagcgatt
atcaattctatgacggcaggtgaacgtcaacgccctgacattattaaaggttcgcgtaag
cgcagaatcgccatgggttcaggaacacaaattcaagatgtgaaccgtttgcttaaacag
ttcactcaaatgcagaaaatgatgaagaaaatgtcatctaaaggtggcatgaaaaagatg
atgcgtggcatgagtggtatgttgccaccgggcatgaaaatgccgggccgctag

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