Shewanella halifaxensis: Shal_1215
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Entry
Shal_1215 CDS
T00654
Name
(GenBank) transcriptional regulator, LysR family
KO
K18927
LysR family transcriptional regulator, L-lactate utilization regulator
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shl03000
]
Shal_1215
Transcription factors [BR:
shl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Shal_1215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_8
HTH_20
HTH_30
NIR_SIR_ferr
KH_SLS1_1
HemN_C
Motif
Other DBs
NCBI-ProteinID:
ABZ75784
UniProt:
B0TJZ7
LinkDB
All DBs
Position
1475698..1476600
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AA seq
300 aa
AA seq
DB search
MSTNFGLELQLIYQFVHLVNAGSFSQAAKELDMPIATVSRKLTKLETVLDKQLLMRNTRK
LRLTEEGIALFQQYQSIISQFDSISGVTVDKPEGTLRIAAPVSIISMIFIKALNEFCEQY
PDIQLHITQNNNVIDLIDEGVDVAIVGGTQPDSSWISSSLGVLNYGLFASQQYIDSAPVL
THPQELAEHALIKVWPLYNWSLKHPNGGSFYYDGKAKLTLSDLHGAVEATVDHGGILYGP
ELFVKEELRAGKLQRLLPEWIGEKRRISILYHQRSHQPLKVKLFIEFMQSKAEGLFSMHS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccaactttggtttggaattacagctgatctatcaatttgtgcatctggtgaat
gcgggcagcttttctcaggccgctaaagagctcgatatgccgattgccacagtgagccgt
aagctgactaagttggagacggtattagataaacagttattgatgcgtaatactcgtaag
ctgaggctaactgaagagggcattgcgctgtttcagcagtatcagtcgattatctctcag
tttgacagcatcagcggggttacggttgataagcctgaggggacgttacgtattgctgcc
cctgtgtcgattatctcgatgatttttatcaaggcgctcaatgagttctgcgagcagtat
ccggatattcagttgcatattacgcaaaacaataacgtgatcgatttaattgatgaaggt
gtcgatgtagcgatagtgggcggtacccaaccagattcatcttggatctctagctcattg
ggtgtgcttaattatggtttatttgcctctcaacagtatatcgacagtgcgcctgtactc
actcacccccaagagcttgctgagcacgccttaattaaagtatggccactctataattgg
tcgctaaagcacccaaatggtggatcattttattatgatggtaaagccaagctgacatta
agcgatttgcatggcgcagtggaggcgacggttgatcacggcggcattctctatggaccg
gaactctttgttaaagaagagctcagagccgggaaattacagagattactgccagagtgg
attggtgaaaaaagacgaatttcgattttatatcatcagcgcagccatcaacccctaaag
gtgaaactgtttatcgaatttatgcaatctaaggcggaaggtttattctcgatgcatagc
tag
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