Shewanella halifaxensis: Shal_1226
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Entry
Shal_1226 CDS
T00654
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shl03016
]
Shal_1226
Enzymes [BR:
shl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Shal_1226
Transfer RNA biogenesis [BR:
shl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Shal_1226
Prokaryotic type
Shal_1226
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
SLC35F
Motif
Other DBs
NCBI-ProteinID:
ABZ75795
UniProt:
B0TK08
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All DBs
Position
1490131..1491195
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AA seq
354 aa
AA seq
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MSELHYLYGKPTSTADLRTHNSDFQVQEILPFAPTGEGEHHLLHIRKDGLNTLEIVKRIS
IFAHVHPKEVTYAGQKDKHAVTEQWFGVRIPGKETPDWQQLNSDQVTVLNAARHSKKLRI
GALAGNRFTLILRNVSDMSDVIRRIDLVKGQGVPNYFGEQRFGHDGKNLEFGRQMFTGRK
VKDRNKRSMYLSAVRSNVFNMACSGRLAQHGTKALAGDCVMLAGSKSYFVAEQWDETLIE
RLNNKDIQLSAPLWGRGLPLAQSEAAQCEADALESLAIDKDGLEHAGLSQERRALLLEPQ
HLQYQVDEDTITLKFALPSGSYATSVLRELFQYQDVQEVARQQMLADQRSAEAD
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattacattatttatacggcaagccaacttcaactgccgatctacgtacccac
aatagtgatttccaagtgcaggagattttacctttcgcgccgacaggtgagggggagcat
catctgctacacatacgtaaagatgggctcaatacccttgaaatcgttaagaggatctcg
atctttgctcatgtacacccaaaagaggtgacttatgccgggcaaaaagataagcatgcg
gttacagagcagtggtttggtgtacgtattccaggtaaagaaacgcctgactggcagcag
ctcaatagcgaccaagttacagtgcttaacgctgcaagacatagtaaaaaactgcggatt
ggcgcgctggctggtaatcgctttaccttaatattgcgtaatgtcagcgatatgagtgat
gtgattagacgcattgacttagtcaaagggcagggcgtaccaaactattttggtgagcag
cgatttgggcatgatggtaaaaatttagagtttggtcggcagatgtttactggccgtaaa
gttaaagatcgtaataagcgcagtatgtatttgtcggcagttcgctcgaatgtgtttaat
atggcctgttcaggtcgtttagcgcagcatggtactaaagccttagcaggtgattgtgtc
atgcttgcaggcagtaaaagttactttgttgccgagcagtgggatgaaacgttaatagag
cgtctaaataataaagatattcagctttcagcaccattgtgggggcgtggcttaccactt
gctcagtctgaagcggcgcagtgtgaggctgacgcacttgagtcactcgcaattgacaaa
gacggtttagagcatgcaggtcttagccaagagagacgtgctttgttacttgagccgcaa
catctgcaatatcaagtagatgaagataccattacccttaaatttgcattaccatctggg
tcttatgcaacctcagtactacgtgagttattccagtatcaagatgttcaagaggtcgcg
cgtcaacagatgctagctgatcaaagaagcgctgaggccgattaa
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