Shewanella halifaxensis: Shal_1278
Help
Entry
Shal_1278 CDS
T00654
Name
(GenBank) conserved hypothetical protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
shl
Shewanella halifaxensis
Pathway
shl00540
Lipopolysaccharide biosynthesis
shl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Shal_1278
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shl01005
]
Shal_1278
Lipopolysaccharide biosynthesis proteins [BR:
shl01005
]
Lipid A
Shal_1278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
DUF7661
Motif
Other DBs
NCBI-ProteinID:
ABZ75847
UniProt:
B0TKP5
LinkDB
All DBs
Position
complement(1559511..1560509)
Genome browser
AA seq
332 aa
AA seq
DB search
MTFLSNPLSLSRASLASLLICTSFPTLADQWHFSFDNDVVIGQDGDYSNGFVFGWQALPR
ADFTLAPWPFSWQKGLRFSDPNKTVQWGAKVYQRMWTPSEIEHDYTQPYDRPYAGILELE
SFTGSYSANLAQKNWFSIGVIGPASGAQAMQELVHKITPSTPPKGWQYQVENQLTLQLAY
EVDALAFRREVTYDSQWELSGYGHTMLGNFRSEANLGFTLRWGDDLADSFGQLSSHAGHF
GQYSAVARKNGSWSVYARAQAGYRFNDLTIDGDVPYDSYVQIKHQQAKASAGVIWAFPTW
SVSWSFEIYTPEYEPDPNKWHGYGVLSYSFVL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
ttgaccttcttatcgaatcccctatcgctcagcagagcaagcttggcgagcctgcttatc
tgtacctccttcccaaccttggccgatcagtggcactttagctttgataacgatgtggta
attggccaagatggcgactattccaatggtttcgtcttcggttggcaggcgcttcctcga
gctgattttacgctagcaccttggccatttagctggcaaaaagggttgcgcttttcagac
cctaacaagacagtgcaatggggggcaaaggtttatcaaagaatgtggaccccgagtgag
attgaacatgattatacccagccctatgatcgcccctacgctggtattctcgaactggaa
agcttcaccggcagctatagcgctaacttggcacaaaagaattggtttagcatcggcgtg
ataggccctgcatctggcgctcaagccatgcaggagttggtgcataaaatcaccccttcc
acccctccaaaaggctggcaatatcaagttgaaaatcaactgactctgcagctcgcttat
gaggtggatgcattggcgtttcgtcgagaggtaacctatgacagtcaatgggagctaagt
ggttacggtcataccatgctgggaaactttcgttctgaagcgaatctaggctttaccctt
cgctggggagatgatttggcagattcatttggccagttaagcagccatgcaggacatttc
ggtcaatatagtgctgtggcacgtaaaaatggtagttggagtgtatatgctcgcgcccag
gctgggtatcgttttaatgatctcaccattgacggagacgttccctatgactcctatgtg
cagataaagcaccaacaagcgaaggcgagtgctggggttatttgggcatttcccacttgg
tcagtgagctggagctttgaaatttacacgccagaatatgagcctgatccgaataagtgg
catggctatggtgtgctcagctacagctttgtgttgtag
DBGET
integrated database retrieval system
