Shewanella halifaxensis: Shal_1583
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Entry
Shal_1583 CDS
T00654
Name
(GenBank) dihydrouridine synthase DuS
KO
K05541
tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shl03016
]
Shal_1583
Transfer RNA biogenesis [BR:
shl03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
Shal_1583
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
NAGLU_C
FMN_dh
Motif
Other DBs
NCBI-ProteinID:
ABZ76149
UniProt:
B0TNZ2
LinkDB
All DBs
Position
complement(1901250..1902233)
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AA seq
327 aa
AA seq
DB search
MQRLKNTDILDSSVRIILAPMEGVVDDLMREILSAINPYDLMVTEFVRVVDQLLPEKVFY
RLCPELQTGGQTLSGTPVRVQLLGQNPDWMAENAARAIELGSKGVDVNFGCPAKMVNRSN
GGAVMLQYPEQLYNVVKAMRDAVPSDQPVTAKIRLGFNDKSLYMENALAIYEAGASELAV
HARSKVDGYKPPAYWEYITDINAKLPIPVIANGEIWNRDDAERCMSITGCDSVMVGRGAI
SLPNLAANIKGDTAYTWQQSLDLMLEYTNRELEGRKSTYYPARIKQWFGYLNRQYPEADT
LFRELRVFKTADEIIGVLKRAQDNLAN
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccttaaaaataccgatattttggacagttctgtgcgaataattttggcgccg
atggaaggcgttgtagatgatttaatgcgagagatcctctctgcaatcaatccttatgat
cttatggttacggagttcgtccgtgtcgtagaccaactgctacctgaaaaggtcttttat
cgtctttgcccagagttgcaaactggtggtcaaacactatccggtacacctgtgcgagtg
cagctactgggacaaaatcccgattggatggcagaaaacgcagcaagggctattgaactg
ggatcaaaaggtgtcgatgtgaactttggctgccctgctaaaatggtcaatcgcagcaat
ggtggcgccgtgatgttgcaatatccggagcaactctacaatgttgtgaaagcgatgcgt
gatgcagttcctagcgaccagcccgttaccgccaaaatacgcttaggctttaatgataag
tcactctatatggaaaatgctctcgctatttatgaggctggcgccagtgaattagctgta
cacgctcgcagtaaagttgatggctataagccacctgcctactgggaatatatcaccgac
attaatgctaagttaccgatcccagttattgctaacggcgagatctggaaccgtgatgat
gccgagcgctgtatgagtattactggctgtgacagtgtgatggtgggacgcggagcaata
tcgctaccgaacttggctgcgaacattaaaggcgatactgcttatacttggcagcaatct
cttgatctcatgcttgagtacacgaatagagagttagaaggtagaaagagtacctattat
cccgctcgaattaagcaatggtttggctatctgaatcggcaatatccagaggctgatacc
ctctttagagagcttagggtatttaaaacagcagatgagatcattggtgtattaaaacgc
gcacaggacaatttggcgaattaa
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