Shewanella halifaxensis: Shal_1678
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Entry
Shal_1678 CDS
T00654
Name
(GenBank) TrkA-N domain protein
KO
K10716
voltage-gated potassium channel
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shl02000
]
Shal_1678
Transporters [BR:
shl02000
]
Other transporters
Pores ion channels [TC:
1
]
Shal_1678
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TrkA_N
Ion_trans_2
Ion_trans
Slo-like_RCK
DUF7126
NAD_binding_7
DUF7161
PMT_4TMC
Motif
Other DBs
NCBI-ProteinID:
ABZ76244
UniProt:
B0TPW5
LinkDB
All DBs
Position
complement(2012131..2013225)
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AA seq
364 aa
AA seq
DB search
MSAQVFSPKQIPHLADINFTVLTNAPWFMLGVFLLLNSIGLLFRARIAWVMSLVLLLTTL
VFTVHYYPNLLLNIVFCSFSIILLLLQSRDFNRSSATAAGIVSVISFVILIIYSTYGSLY
FGDGFSPKITDLSMAFYFSMVTMTTVGYGDILPVTETARLFTISMIIAGIAVFATSVSTI
FGPFIRDGLSKLIQGKKHTMKRADHFIVCGTSAMATNTIIKLHQRGLAVTIITVRPSDEF
EIIEQSLEGKFDIISGDSSDTAVLKQAGLEQCRAILALTDNDADNAFIVLSAKDLSANAK
TVIIVNDSKNLSKIQRVQPDVLLSPQLFGSEVLARMLNGEAMDNNDLAELLLNSAHGIPS
KNDL
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctcaggtgtttagtccgaagcaaatcccacacctggcagatattaattttaca
gtactcactaatgcaccttggttcatgcttggggtgtttttactgctgaactctatcggt
ttactgtttcgtgcacgtatcgcttgggttatgagccttgtactgctcctaacgacctta
gtttttactgtacattattaccctaatcttctgctaaatatcgttttctgtagcttcagc
attatcttattattgctccaaagtcgtgatttcaaccgcagcagtgcaaccgcagcgggg
attgtctctgtgattagttttgtcattctaatcatctactcgacatacggcagcttgtat
tttggtgacgggttttcgcccaaaataaccgacttgagtatggcattttatttttccatg
gtaaccatgaccactgttggttatggcgatatcctacccgtgactgagaccgcaagactt
tttactatttcgatgattattgccggaattgcagtatttgccacatccgtaagcactatt
tttgggcctttcattagagatggtttaagcaaacttatacagggaaaaaagcacactatg
aaaagagccgatcactttattgtttgtggtacttccgccatggcgacaaataccattatt
aaactgcatcagcgcggattagccgtcacaattatcacggtaagacccagtgatgagttt
gaaataattgagcaaagtctggaggggaaatttgatattatctccggcgacagcagcgat
accgccgtgctaaaacaggctggtttagagcagtgccgtgctattttagcgctaacggat
aatgatgctgataatgcctttatcgtattatcggctaaagatttaagcgctaatgctaaa
acagtcatcatagtcaacgacagtaagaatttatctaaaattcagagggttcaacctgat
gttttattgtcaccacaactgtttggtagtgaagtactggcacgcatgctaaatggtgaa
gcgatggataataatgatttagcagaactgttactcaattcagctcacggcataccatca
aaaaatgatttgtag
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