Shewanella halifaxensis: Shal_1900
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Entry
Shal_1900 CDS
T00654
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
shl
Shewanella halifaxensis
Pathway
shl00730
Thiamine metabolism
shl01100
Metabolic pathways
shl01240
Biosynthesis of cofactors
Module
shl_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Shal_1900
Enzymes [BR:
shl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Shal_1900
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ABZ76465
UniProt:
B0TRP7
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All DBs
Position
2282952..2284940
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AA seq
662 aa
AA seq
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MSNRRETRAQAQQFIDNLKPLQHPNSEKIYLQGSRADLKVGMRQIHQADTLIGGNETNPV
FEANPPLKVYDCAGAYSDPDANIDVRKGLEKFREHWIEERGDTEQLAGVSSGFTQQRLAD
DGLDHLRFESLLPPRRAKTAKRVTQLHYARQGIITPEMEYIAIRENMALAEVNDPILTQK
DKGESFGAVIGEPITPEFVRQEVARGRAIIPLNINHPEAEPMIIGRNFLVKVNANIGNSA
VTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWIIRNSPVPIGTVPIYQALEKVN
GIAEDLNWETFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCL
SHHKENFLYEHFRDICEICAAYDVSLSLGDGMRPGSIADANDEAQFSELTTLGELVKIAW
QYDVQTIIEGPGHIPMNLIKENMDKQLELCDEAPFYTLGPQTTDIAPGYDHFTSGIGAAM
IAWYGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAGDVAKGHPSAQIRDNALSKAR
FEFRWEDQYNLGLDPDTARAYHDESLPQESAKVAHFCSMCGPKFCSMKITQEVRDYAAAK
ERDELANNIDIKSDAEYQSCADSETTSERELGMAQMSAEFKAKGAELYHEAADKQRDAVL
ED
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcgtcgcgaaacccgagctcaagctcaacagtttattgataacttaaagcca
ctgcagcaccccaattctgagaaaatttacctacaaggcagtcgagccgatctaaaagtg
ggtatgcgtcaaatacaccaagcagataccttgattggtggcaatgaaactaatcctgtt
tttgaagcgaatccaccgctaaaggtttatgactgcgccggtgcttattccgatcccgat
gctaatatcgatgtgcgcaaagggcttgaaaaattccgtgaacactggatagaagagcgc
ggcgataccgagcaacttgccggtgtgagctcgggctttacccaacagcgattagccgat
gatggcctagatcatttacgcttcgagtctttattgccgccacgccgcgcaaaaacggct
aaacgcgtgacccagttacactacgcaaggcagggtattatcactccagagatggagtat
attgccattcgtgaaaacatggcgctggcagaagttaatgaccccattttaactcaaaaa
gataaaggcgaaagttttggcgcagtgattggcgagccgataacgcctgaatttgtcagg
caagaagttgcccgtggccgcgccattatcccattaaatattaaccatcctgaagctgaa
ccgatgattatagggcgtaactttttggttaaagtgaatgccaatattggtaattccgcc
gtgacatcgtcaatcgaagaggaagtcgaaaagctggtatggtcgactcgttggggcgcc
gataccgtaatggatctgtctaccggacgttatattcatgaaacccgcgagtggattatt
cgtaactcgccagtgccaatcggtacggtgcctatttaccaagcgcttgagaaagttaat
ggcattgctgaagatcttaactgggaaacctttcgcgataccttgatagagcaagccgag
cagggcgttgattacttcaccattcatgccggtgtgctactacgttatgtgccaatgacg
gcaaaacgcttaactggcatcgtttctcgtggcggttcaatcatggccaaatggtgcttg
tcgcaccataaagaaaacttcctctatgaacattttagagatatttgcgagatctgcgcc
gcatacgatgtttcattatcgctgggtgacggcatgcgtcctggttcaattgccgatgcg
aacgacgaagcgcaattttcggagttaaccaccttaggcgagctggttaaaatcgcttgg
caatatgatgttcagaccattatcgaaggtcccggtcatattccaatgaatctcatcaaa
gagaatatggataagcagcttgagctgtgtgatgaagcgccgttttacaccttaggcccg
caaacgaccgatattgcaccgggttacgatcatttcacttcaggcattggcgcggcaatg
atcgcttggtatggctgcgccatgctgtgttacgtcacgccaaaagagcatcttggtctg
ccgaacaaagaagatgtaaagcaaggactcattacctacaagattgctgctcatgcaggt
gatgtggcgaagggccatcctagcgcgcaaatccgtgataacgcactgtctaaggcgcgt
tttgagttccgttgggaagatcagtataacttgggtttagaccctgatacggcgcgggcc
tatcatgatgaatctttacctcaagagtctgccaaagtggcacatttttgctccatgtgt
ggtcctaaattctgttcaatgaagatcacccaagaggtacgagattatgccgcggcgaaa
gagcgtgacgagctagcaaacaacatcgatatcaaatccgatgccgagtatcaatcatgc
gcagatagcgaaacgacgtcagagcgagagctgggcatggcgcagatgtcagccgagttt
aaggctaagggcgcagagctctatcatgaagccgccgataaacagcgtgatgcggtatta
gaggactag
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