Shewanella halifaxensis: Shal_1918
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Entry
Shal_1918 CDS
T00654
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
shl
Shewanella halifaxensis
Pathway
shl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Shal_1918
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shl01007
]
Shal_1918
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shl03016
]
Shal_1918
03029 Mitochondrial biogenesis [BR:
shl03029
]
Shal_1918
Enzymes [BR:
shl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
Shal_1918
Amino acid related enzymes [BR:
shl01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Shal_1918
Transfer RNA biogenesis [BR:
shl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Shal_1918
Prokaryotic type
Other AARSs
Shal_1918
Mitochondrial biogenesis [BR:
shl03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Shal_1918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ABZ76483
UniProt:
B0TSA3
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All DBs
Position
2304898..2306694
Genome browser
AA seq
598 aa
AA seq
DB search
MRSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIVQVVYDPDLPEVFDVA
STLRSEFCVQIKGLVRARPDSQINADMRTGEVEILGLELTILNSSAPLPINMDKNQHNTE
EQRLKYRYLDLRRPEMADRIVFRSKVTSAVRRFLDGNGFLDIETPILTKATPEGARDYLV
PSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSF
MSSDQVMAKTEEMVRGLFQELLNVDLGEFPKMTFEEAMRRFGSDKPDLRNPLELIDVADI
VKEVEFAVFNGPANDPEGRVAVLSIPGGAKLSRKQLDEYAKYVTIYGAKGLAWMKVNDLD
KGMEGIQSPVLKFLSEDVVKALLERTGAQTGDLILFGADKANIVAESMGALRLKAGEDFD
LLQGEWKPLWVVDFPMFERTSDGGLHAMHHPFTAPSNMTPEELEANPIAAISDAYDMVLN
GCELGGGSVRIHDSKMQSAVFRILGINDEEATEKFGFLLEALRYGTPPHAGLAFGLDRII
MLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPVQLAELGVSVVEAETKDSETKDAE
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcattattgtggagacgtcaataagtctcacgtaggtcaagaagtgacccta
gtgggttgggttaatcgcagccgagatttaggcggcgttgtttttctcgatcttcgtgat
agagaaggtatcgttcaggttgtttatgatccagaccttcctgaagtgtttgatgttgca
agcacacttcgcagcgaattttgtgttcagattaaaggccttgtaagagcaagacctgac
agccaaattaacgccgatatgcgtactggcgaggttgagattttaggtctagagctaaca
attttgaacagctctgcgccattgccaatcaacatggacaaaaaccagcacaatactgaa
gagcagcgtcttaagtaccgttacttagatctacgtcgtccagagatggcagatcgcatt
gttttccgctcaaaagtgaccagtgcggtaagacgtttcttagatggcaacggtttctta
gatattgaaacgccaattctgactaaagcgacaccagaaggtgcacgtgattacctagta
cctagccgtacttataaaggtcagttctttgcattgccacaatcaccacaactgtttaag
cagttgttgatgatgtctggttttgaccgttactaccaaatcgttaagtgtttccgcgat
gaagacttacgtgctgaccgtcagcctgaatttactcaaatcgatatcgaaacgtctttc
atgagctctgatcaagtgatggcgaagactgaagagatggttcgtggtttattccaagag
ctattgaatgttgatttaggtgagtttcctaagatgacattcgaagaagcgatgcgtcgt
ttcggttctgataagcctgatttacgtaacccgcttgagttgattgatgttgctgatatc
gttaaagaagttgagtttgcagtatttaatggcccagcaaacgatcctgaaggtcgtgtt
gcagtattaagcattccaggtggcgctaagctgtcacgtaaacagttagatgaatacgca
aagtacgtcactatctatggcgcgaaaggcctagcttggatgaaggtcaatgaccttgat
aagggcatggaaggcattcagtctccagtacttaagttcttaagcgaagatgttgttaag
gcattgcttgagcgcactggcgcacaaactggcgatctaattctatttggtgcagataaa
gccaatatcgttgctgaatcgatgggcgcactgcgtttaaaagcgggcgaagacttcgac
ttgttacaaggcgagtggaagccactttgggttgttgacttcccaatgtttgagcgcaca
tctgatggcggcctgcatgcaatgcaccatccattcacagcgccaagcaacatgacacca
gaagagctagaagcgaacccaatcgctgctatttctgatgcatacgatatggtattaaac
ggctgtgagttaggcggtggttctgttcgtattcacgatagcaaaatgcagtcagcggta
tttagaatactaggcattaatgacgaagaagcgactgagaagtttggtttcttacttgaa
gcattacgctacggtacgccgccgcatgctggtttggccttcggcctagaccgtatcatc
atgttgatgacgggtgcgagttcaatccgtgacgtgatggcgttccctaagacaacgacg
gcagcttgtccattaacgaacgcaccaggatttgcaaatccggtacaactagctgaactt
ggtgtcagtgttgtcgaagcggaaactaaagattctgaaacaaaagacgctgaataa
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