KEGG   Shewanella halifaxensis: Shal_2001
Entry
Shal_2001         CDS       T00654                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
shl  Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:shl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shl03400]
    Shal_2001
Enzymes [BR:shl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Shal_2001
DNA repair and recombination proteins [BR:shl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Shal_2001
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C UvrD_C_2 Zn_ribbon_Top1 AAA_30 ResIII Zn_ribbon_recom
Other DBs
NCBI-ProteinID: ABZ76562
UniProt: B0TT01
LinkDB
Position
2412426..2415467
AA seq 1013 aa
MELRLHSVEFGFLQGIFFCNSAHLCEQGLTINGRLYPYPEIDKTVEVTQGWFTQTLIWGD
KRFGFFRFVDSKPLFRTALNNRIAFCRTALQLSFDNLLVDVTRFDRVFGLHQRYLRDSDK
TLLQSEYRGALDAFNLSEHFTTLGFDTSKLNCRLAKFIKQPDIFTERYNQWWQDKQLDAY
KNLFDSLEANPLTQFQREACVVDENNTLVIAGAGTGKTSTMAAKAAYLVNQGLAQPQDIL
MLAYGKDAQVELEQRVSSIAGGSGALTAIKVSTFHALGKEIIEYYLNRSSQVSVLARDEK
QFTQFIDQQIDQIVADPQMADPVADYFGRYLYPQVNELAFKSDGQYRAYLKNNEIRALSG
DLVKSFQELTICNYLYTHGIEFEYEPKYRVPVTEPGKSVYQPDFYIPVLDAYLEHFGIDK
LGNTRPDIDKDTYNQSREWKIALHKRHNTCLMQTFSWQAENGALEKELEALLCKRCEQLD
ISQSELFKPISPEAVFAQVKALGIYRNVSRLMASFVNLFKSSGMTLSKLESMKLPNTNSN
SKSNTKPNSKLKSKTTAKHSAHYNQLRWQAFLHLFSWVITRYQAQLTAHNTLDFSDMIAQ
ALNMAREKDFHQKTAERFRYKYIMVDEFQDISHERADLVKALRDSNPGCALFCVGDDWQA
IYRFTGSDLSLTTEFEPTFGATQTIMLDKTFRFNNRIEKVASRFIQANPAQLKKQLKTHS
QSDNPEVCLLVNNKQIAIEQTFASIMEVTDKTRADIDCEAVSVMLISRFKSSLKDLSVWQ
KRYPQLSISGFSAHASKGKQADFVIVLDVNDDKYGFPCKIDSDPILETLLPQLDNYADTE
ERRLFYVALSRAKQTVFVQAELGKESVFVKELRSYGGDVRCYLSDLAPMYNESLCCPQCK
EGKLIPREGRFGLFYTCSLGQDYCDTKIDACSVCNSAPMLRNETHHFCSSEKCGHRLPVC
PECISGKLVVRTNSKSGKSFLACSGHKRDDKNSCQYTCNLAEHRVDKVLGTAA
NT seq 3042 nt   +upstreamnt  +downstreamnt
atggagcttaggctacattctgttgagttcggttttctgcaggggatatttttctgtaat
agcgcgcatctatgtgagcaaggtttaacgattaacggcaggctttatccgtatccagag
attgataaaaccgttgaggtgacacaaggctggtttacccaaacattgatttggggagac
aagcgctttggtttctttcgttttgtcgatagcaagcctttgtttagaacggcacttaat
aaccgtattgccttttgtcgcactgcattgcagctcagcttcgataacttgctggtagac
gttactcggtttgatagggtatttggcctacatcaacgttatttgcgagactctgataaa
actctcttacagagcgaatatagaggggcgctggacgcttttaatcttagtgaacatttt
acgactctgggttttgataccagtaaactcaactgccgtctggcgaagtttattaagcaa
cccgatatttttaccgaaagatacaaccagtggtggcaggataagcagctagatgcatat
aagaacttatttgattcgttagaagctaatcctctcactcaatttcagcgagaggcctgt
gtggtggatgagaataacaccttggtcattgctggtgcgggcactggtaaaaccagcacc
atggcggctaaagctgcctatctagtcaatcaaggtttagcgcaaccgcaagacatatta
atgttggcttatggcaaagacgcacaagtagagcttgagcagcgagtgagttcaatcgca
gggggctccggggcgttaacggcgataaaagtcagcacctttcatgcattgggcaaagag
atcattgagtactatttaaaccgctcaagccaagtgtcggtactggcccgtgatgaaaag
caatttactcaatttattgatcaacagatcgatcaaattgttgccgatccccaaatggcc
gatcccgttgccgattactttggtcgttatctttacccacaagtgaatgagttggcgttt
aaatctgatggacaatatcgggcttatcttaagaataatgagataagggcgctatctggt
gatctggttaaaagttttcaagaactgactatctgcaattacctttacactcacggcatt
gagtttgagtatgagcctaagtatcgcgtgccggttactgagccgggcaagagtgtttat
caacctgacttttatattccggtacttgatgcatatttagaacactttggtattgataag
ctgggcaacacacgccctgatattgataaagatacctataaccagagtcgcgaatggaag
attgcgctgcataaacgtcataacacctgcttgatgcaaaccttcagttggcaagccgag
aatggcgccttagagaaggagctagaagcgttgttatgtaagcgctgtgagcaacttgac
ataagtcaaagtgagctatttaaacctatctctcctgaggcggtgtttgcgcaagttaag
gctctagggatctaccgtaacgttagccgattaatggcgagttttgttaacctgtttaag
tcatcgggcatgaccttgtccaaacttgaatcgatgaagctgcctaatactaattcgaat
agtaagtcgaacacaaagccgaacagtaagcttaagtctaaaacgacagctaaacattca
gcacattataatcagctaagatggcaggcttttttacatctttttagctgggttattaca
cgttaccaagcccaattaaccgcgcataacaccttagatttttcagatatgatcgcccag
gcattaaatatggctcgggaaaaagattttcatcaaaaaactgccgaacgttttcggtat
aaatacatcatggtggatgagtttcaagatatctctcatgagcgagctgatttagttaag
gcattgagggattctaatcccggttgtgcactgttctgtgtcggtgacgattggcaggct
atctatcgtttcacgggtagcgatcttagtttaaccacagagtttgaacctacctttggt
gcaacccaaacaattatgcttgataaaacctttagatttaataaccgcattgaaaaggtg
gcttcaaggtttatccaggcaaatcctgcccagctaaagaagcaactgaagacgcatagc
caaagcgataatcctgaagtgtgcttgttggttaataataaacagatagcaatagaacaa
acctttgccagcattatggaggtgacagataagactcgggctgatattgattgcgaggca
gtcagcgtgatgttgattagtcgctttaagagctcgttgaaagatttgagtgtatggcag
aagcgttatccgcagctttcaatttctggtttctctgctcatgcctctaaaggtaagcag
gccgattttgtgattgtcttggatgtgaatgacgataaatacggttttccgtgcaagata
gacagcgatcctatcttggagaccttgctgccccaactcgataattacgccgataccgag
gagcgccgcttgttttatgtggcgttatcgcgagctaagcaaacggtatttgtgcaggca
gaactgggcaaagagtcggtatttgttaaagaactacgcagttatggaggcgatgtgcgt
tgttacttaagtgatttagcacctatgtacaacgagtctttgtgttgtccacagtgcaaa
gagggcaagcttattcctagagaggggcgctttggtctgttttacacctgctctctagga
caagattattgtgacactaagattgacgcctgctctgtttgtaacagtgcgcctatgctt
cgcaatgaaactcatcatttttgcagcagtgaaaaatgtggccatcggctaccagtttgc
cccgagtgtatttcgggtaagttggttgtgcggaccaatagtaaaagcggaaagtcgttt
ttggcatgtagtggacataaaagagacgacaaaaacagctgtcagtacacatgtaatttg
gcagagcatcgagtcgataaagtactgggaaccgcggcttga

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