Shewanella halifaxensis: Shal_2039
Help
Entry
Shal_2039 CDS
T00654
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shl03032
]
Shal_2039
03400 DNA repair and recombination proteins [BR:
shl03400
]
Shal_2039
Enzymes [BR:
shl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Shal_2039
DNA replication proteins [BR:
shl03032
]
Prokaryotic type
DNA Topoisomerases
Shal_2039
DNA repair and recombination proteins [BR:
shl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Shal_2039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ABZ76600
UniProt:
B0TT39
LinkDB
All DBs
Position
2458757..2461483
Genome browser
AA seq
908 aa
AA seq
DB search
MTDLASSITPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRLAQPFSMRYPLIDGQGNFGSVDGDAAAAM
RYTEIRMDKVAHQLLADLEKETVDFVPNYDGTEFIPAVLPTRIPTLLVNGSSGIAVGMAT
NIPPHNINEVISGCLALIEDPALSIEQLMEYIPGPDFPTAAIINGRKGIIDAYKTGRGRA
VMRSRAEIEEENGRERIIVHEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDGMR
IVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRREVV
TRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPAEAKVKLVAEGWELGHVKG
MLEKAGDDAARPEWLEPEFGIRDDKYYLTEQQAQAILELRLHRLTGLEHDKIIAEYEELL
EIIAALLFILGSPQRLMEVIKEELEEVLANFGDERRTVINANEVDMSLEDLINEEDVVVT
LSHLGYAKYQVLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSDFGKMYWL
KVYQLPLASRTARGRPIVNLLPLAEGERITAILPVREYAEDKYIIMATSHGTVKKTALTA
YSNPRANGIIAVNLKDGDQLIGVDITDGNNDIMLFSNEGKVVRFNEKARSSETGEVKIDP
ETGEEVIALRAMGRTATGVRGIKLEDGQTVVSLIVPKGEGDILTVTENGYGKRTDLAEYP
AKSRGTKGVVSIKVSERNGAVVGAVQVGENDEIMLISNKGTLVRTPATGVSSIGRNTQGV
TIIRTAEDEKVVGLQRIDEIQVPEVELDEEGNPIIVEGAAETEGQTEAANTDASNTEGES
TETPKTED
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctggcttcatctataacaccaattaatattgaagacgaattaaagaattca
tacttagattacgccatgagcgtaatcgttggccgtgcactgcctgacgttcgtgacggt
ttaaaaccggtacatcgccgcgtactattcgccatgagcgaattgaaaaacgactggaac
aagccttataaaaagtctgctcgtgtcgttggtgacgtaatcggtaagtatcacccacat
ggtgatacagctgtatatgacacaatcgttcgtttggctcagcctttctctatgcgctac
ccacttatcgacggtcaaggtaacttcggttctgttgacggcgatgcggcggcagcaatg
cgttataccgaaatccgtatggacaaggtggcacatcagcttttagccgatcttgagaaa
gagaccgttgacttcgttccaaactacgatggcaccgagtttattcctgccgttctacca
acacgcattccaacactactcgtgaatggttcgtcaggtattgcggttggtatggctaca
aacattccaccacataacataaacgaagttatcagcggttgtttagcgctaattgaagac
ccagcattatctatcgaacagttgatggaatacattccgggtcctgacttcccaacggct
gcgattatcaatggccgtaaaggcattattgatgcgtataagactggccgtggccgtgct
gttatgcgttctcgtgccgagattgaggaagagaatggccgtgagcgtattattgttcac
gaaattccatatcaagttaacaaagcgcgtttgattgaaaaaatcgccgagcttgttaaa
gacaaaaagatcgaaggcattagtggtctacgcgacgaatcagataaagacggtatgcgt
atcgttatcgagattaagcgtggtgaagtgggtgaggttgttcttaataacctttacgca
cagactcaaatgcagtgctcttttggtattaacatggttgctctgaccaatggtcagcca
aaactgtttaacctaaaagagatgctagagtgctttattcttcaccgtcgcgaagtggtt
acgcgtcgtaccgtatttgaattacgtaaagcacgtgaacgcgcacatattcttgaagcg
ttagcggtagccttagcaaacatcgacccaattattgccttgattaaagcctcaccaact
ccagctgaagcgaaagttaagctagttgcagaaggttgggaacttggccacgtgaaaggc
atgcttgagaaagctggtgatgacgcggcgcgccctgaatggctagagcctgaatttggt
attcgcgacgataagtactacctgactgagcaacaagcacaagcaattctagagttacgt
ctacaccgtttaaccggtctagaacatgacaagatcattgcagaatacgaagagctacta
gaaatcatcgcggcactactattcattcttggtagtcctcagcgtttgatggaagtgatt
aaagaagaacttgaagaagttctagcaaactttggtgatgagcgtcgtaccgttattaat
gctaacgaagttgatatgagtcttgaagaccttatcaatgaagaagacgttgtagtaacg
ctgtctcacttaggctatgccaagtaccaagtactgtctgattaccaagctcagcgccgt
ggtggtaagggcaaagcagcgactaaagtgaaagacgaagatttcgttgagaaactattg
gtcgctaacactcatgacaccatcttgtgcttctctgactttggtaagatgtactggtta
aaagtttaccagttaccattggctagtcgtactgctcgtggtcgtccaatcgttaactta
ttgccattggcagaaggtgagcgtattactgcgattctacctgttcgtgaatatgctgaa
gataagtacattatcatggcaacgtctcacggtacggttaagaagactgcattgacggct
tatagcaacccacgtgcaaacggtattattgccgttaaccttaaagatggcgatcagcta
attggtgttgatattactgacggtaataacgatatcatgctgttctctaacgaaggtaaa
gtggttcgctttaacgagaaagcccgtagctctgaaactggtgaagttaagatcgatcct
gagacaggtgaagaagttatcgcactacgtgcgatgggacgtactgcaacgggcgttcgc
ggtattaagcttgaagacggccaaactgttgtatcgctaattgtacctaagggcgagggc
gatatcttaactgtgactgagaacggttatggtaagcgtaccgatttagctgaatatcca
gcgaagagccgtggtactaaaggtgttgtctctatcaaggttagcgaacgtaacggcgcc
gtagtcggtgcagtacaagttggcgaaaatgatgagatcatgctgatcagtaacaagggt
accttagtacgtactccagctactggtgtatcaagcattggtcgtaacactcaaggtgtg
accattattcgtaccgctgaagatgaaaaagtggtaggtctacagcgtatcgatgaaatt
caagttcctgaagtagagctagatgaagagggcaacccaatcatcgttgaaggcgctgca
gaaactgaaggtcaaactgaagctgcaaacacagacgctagcaataccgaaggcgaaagt
actgaaacgccaaaaactgaagattaa
DBGET
integrated database retrieval system
