Shewanella halifaxensis: Shal_2302
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Entry
Shal_2302 CDS
T00654
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
shl
Shewanella halifaxensis
Pathway
shl03030
DNA replication
shl03430
Mismatch repair
shl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Shal_2302
03430 Mismatch repair
Shal_2302
03440 Homologous recombination
Shal_2302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shl03032
]
Shal_2302
03400 DNA repair and recombination proteins [BR:
shl03400
]
Shal_2302
Enzymes [BR:
shl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Shal_2302
DNA replication proteins [BR:
shl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Shal_2302
DNA repair and recombination proteins [BR:
shl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Shal_2302
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ABZ76861
UniProt:
B0TVH6
LinkDB
All DBs
Position
2787445..2788086
Genome browser
AA seq
213 aa
AA seq
DB search
MTNTTHSRPIQPADTVIVLDFETTGLSPNQGDRAIEIGAVMLKDGKVIDRFQQLMNPGFR
VSGFIENYTGISNEMLSDAKSCETVMTQFADFIGDYNLVAHNASFDQRFLDAELSRVNCN
YPGQFACSMLIARRLYQDAPNHKLGSLIHYKNIQHDGVFHRALADSEMTADLWLVMLEDL
NADYQIKRADFSLLQAIAKQSKASVSQYLARQR
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
ttgaccaatacaacccactcacgcccaattcagcctgccgacaccgtaatagtgctcgac
tttgaaaccacgggtctatctcccaatcaaggtgatcgagcaattgaaatcggtgctgtc
atgcttaaagatggcaaggtcattgataggtttcaacaactaatgaacccaggttttaga
gttagtggctttatcgagaactacacggggatcagtaatgagatgttgagtgacgcgaag
tcatgtgaaacggtgatgactcaatttgcagacttcatcggtgattacaacctcgtcgcc
cacaatgcctcattcgaccaacgctttttggatgccgaactcagtcgagttaactgcaat
tatcctgggcaatttgcctgctctatgttaattgcacgcaggttatatcaagacgcgccg
aatcataaactcggcagtttaatccattataaaaatatccaacatgatggtgtgtttcac
cgagccttagccgatagtgaaatgaccgccgatctttggctagtcatgcttgaagattta
aacgcagattaccagatcaagcgagctgacttttccttattacaagccattgccaaacaa
agcaaagctagcgttagccaatatttagcacgccagcgctaa
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