Shewanella halifaxensis: Shal_2399
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Entry
Shal_2399 CDS
T00654
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K16052
MscS family membrane protein
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shl02000
]
Shal_2399
Transporters [BR:
shl02000
]
Other transporters
Pores ion channels [TC:
1
]
Shal_2399
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Msl2-3_C
RRM_ESF1
Motif
Other DBs
NCBI-ProteinID:
ABZ76957
UniProt:
B0TJG1
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Position
complement(2899303..2900904)
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AA seq
533 aa
AA seq
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MLRPISALLLFISLIFPLFVHSTAVIKAAQQPTEEVKPAPTKEESYEYQDGLFRDTPRGT
LAGLFEAAFEQDYDKAAKYLDLRYLPDDMDAALGPEYAKQLIAIIERNIWVNLQEINDTP
GGTSGDQLPNYRDAFGRVEIKGSEITLLLQKVPSKELGSIWKISNATIAKVPLLYSELGY
GPVVEWFVQHIPQGHLFKLNLWEWALLVCYLLLALLVVIPITWVAKKLILRSDYQYKEDV
AHLVIGPFRLLAALLLVRAWMAHTTLSANVIEVVNTGVLLLIAVIWFIWSLTDVVQNSLR
LRWIKRGNSQSASLLRPLANFTRVMLVALSVLIWLEHLGFDASTILAGLGIGGIAIALAS
KQSIENFIGTITLYSSAPIKVGNIGRFGSITGTVEEIGLRCTRIRTIDRSVINVPNARLS
EMDIENISEREKIRLKTDIRLDYRTTTEQIHNIIDDIRTLLEGHEKVEESPLRVTFKGFG
LYGLQLNVFAYIGTTDFAEFQLVSEELHFGIMNIVAEHGSRIVPVVPIAAAQC
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgttacgacctatctctgctttactgttatttatttcgctaatatttccactctttgtc
catagtacggccgttatcaaggccgcgcagcaaccgacagaggaggtaaagcctgcaccg
actaaagaggagtcgtacgagtatcaagacggcttatttagagatacgcctaggggcact
cttgcgggcctttttgaggctgcttttgaacaagattatgataaagcggctaaatattta
gacttacgttacttacctgatgatatggatgccgcactgggtcctgaatatgctaaacaa
ctgattgcgatcatcgaacgcaatatttgggtcaatctgcaagagatcaacgatacgccc
ggcggaacaagtggagaccaactgcccaattatcgtgatgcctttggtcgggtggagatt
aagggcagtgagatcaccctactgctgcaaaaggtgccgagtaaagaactaggctctatc
tggaagatctcaaatgccactatcgccaaggtgccattgctatatagcgagttaggctat
ggacctgtggttgagtggttcgtacagcacattcctcaaggtcacctgtttaaactaaac
ctttgggagtgggcactgctagtttgctatctattgttggccttgctcgttgttattcca
atcacctgggtagcaaaaaaactgatattgcgcagtgattatcagtataaagaggatgtc
gctcatcttgttatcgggccatttagactactcgctgccttgttattggtaagggcatgg
atggcacataccacgctatcggcaaatgtaattgaagtcgtcaacactggcgttttgctc
cttattgcagtgatctggtttatttggtcattgaccgatgtagttcaaaacagtttgcgc
ctacgttggataaagcggggaaacagccaaagtgcatcgttgttaagaccgctagccaac
tttacaagagtcatgctggtggcgttatcggtacttatctggttagagcatttgggcttt
gatgcctccaccattttagccggtttagggataggtggtattgccatcgcattggcctca
aagcagtcgattgaaaactttattggcactatcaccctgtattcatcggcgccgattaag
gtaggcaatattggtcgctttggcagcattaccggcacagtggaggagatagggctgagg
tgtacacgtatacgaactatcgatcgttcagtgatcaatgtgccaaatgcgagattgtcg
gagatggatatcgaaaatatttctgagcgggaaaaaattcgcctgaaaacggatattcgt
ttggattatcgtacaactaccgagcaaattcacaacatcatcgatgatatacgcacctta
ttagaaggacatgaaaaagtggaagaaagcccactgagagtgacctttaaaggttttggc
ttatacggtttgcagctcaatgtgtttgcctatatcggtacgacagattttgctgagttt
cagttggtgtctgaggagcttcattttggcattatgaatattgtcgccgagcacggctca
cggatagtgcctgtggtgcctatcgctgcggctcagtgctaa
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