Shewanella halifaxensis: Shal_2469
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Entry
Shal_2469 CDS
T00654
Name
(GenBank) transcriptional regulator, LuxR family
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shl03000
]
Shal_2469
Transcription factors [BR:
shl03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
Shal_2469
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GerE
VpsT-like_REC
Sigma70_r4_2
Sigma70_r4
HTH_40
HTH_38
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ABZ77027
UniProt:
B0TJN1
LinkDB
All DBs
Position
complement(2972031..2972666)
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AA seq
211 aa
AA seq
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MFKVTHWVLVTRSHLFADLLNTRWPQEFLVKLHRISPEHFNGELLESRITIILVDLSTVD
VQTAYQIQKRIEKGCNIARVVFVHFPKQLDAKFLIHPSVTAGVFYSDASLEAIGEGMADI
VKGKVVIPQCVTESNGSNDAAVDEVETLTIREREVLQVLRSGSTNIAIANKLFVSESTIK
THLYRAFRKIGVSSRGQAIAWAQTNMHEVMQ
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagtgacacattgggttctggtaacccgctcgcatttatttgcggatcttctt
aataccagatggccacaagagttcttggtcaaactacatcggatctctccagagcacttt
aatggcgagctgttagagagccgcatcactataatcttggtcgatctgtccactgtggat
gttcaaaccgcatatcaaattcaaaagcgcattgagaaaggctgtaatattgcccgtgtc
gtatttgtgcattttccaaaacaacttgatgccaagttcctgatccatccttcagtgacc
gcaggggtattttattccgatgcttctctggaagcgataggtgagggcatggccgatatt
gtaaaaggcaaagttgttattccacaatgcgttactgagagtaatggcagtaacgatgcc
gcggttgatgaagttgaaaccttaacgattcgtgagcgtgaggtattgcaagtattacgt
agtggaagtaccaatattgctatcgcaaataagctttttgtcagcgaaagtacgataaag
acacacctttatcgtgcgttcagaaaaattggcgtatcgagtcgcggacaggcaatagcc
tgggctcagacgaatatgcatgaagtgatgcaatga
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