Shewanella halifaxensis: Shal_2506
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Entry
Shal_2506 CDS
T00654
Name
(GenBank) lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
shl
Shewanella halifaxensis
Pathway
shl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Shal_2506
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shl02000
]
Shal_2506
Enzymes [BR:
shl01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Shal_2506
Transporters [BR:
shl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Shal_2506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
APS_kinase
DEAD
nSTAND3
AAA_16
AAA_29
AAA_22
DUF87
RsgA_GTPase
ABC_ATPase
AAA_23
NB-ARC
AAA_15
Motif
Other DBs
NCBI-ProteinID:
ABZ77063
UniProt:
B0TK44
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Position
complement(3022225..3024048)
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AA seq
607 aa
AA seq
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MTTSPKNEVWTVFKRLLGYLKPLKTVLAFAIIGLAMYALVDATFIAVIKPFIDEGFGGQA
GQAAQAAGGISSLDLGTSGGFNSSSDVLLMAPFVVIGLFSLRGLANFLSTYCISYMSARV
IMDMRQEVFEHYLTLPVSYIDKENTGNLISRVTYDTEQIARASGSALITIVRDSITVVGM
IAIMFYFSWKLSLVILVVGPIIGVVITVVSRRFRKVSKQIQTAMGGVTAATEQMIKGHKN
VLSFGGQETEAQRFAKVNDQNRYQTMKLATAQAISQPVVMIIGSFALAFVLYAASIESMK
AELTAGTFATILGAMLAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTEPESDTGTLEVD
RVKGELAFNNVDFSYPGHEKLALNGIDFKVEQGQTLALVGRSGSGKSTIASLITRFYTGL
KAGEITLDGHNINDYKLKSLRSQVALVSQQVTLFNDSIANNIAYAYPGVATKEQIIEAAT
LAHAMEFIEPMPEGLDTQIGENGVMLSGGQRQRIAIARAILRNSPVLILDEATSALDTES
EKAIQQGLDNLRQNRTSIVIAHRLSTIESADQILVVDQGQIVERGTHVSLLAKGGVYANL
YQMQFGS
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatctcctaaaaatgaagtctggactgtatttaagcgcctgttaggctattta
aagcctcttaaaacagtgttagcttttgccatcattggccttgcaatgtacgcccttgtc
gatgccacttttattgcggtgattaaacctttcatcgatgaaggcttcggcggtcaagct
ggacaggcggctcaagctgctggtggcataagtagtttagacttaggcacgagcggtggt
ttcaactcatcgagtgatgtcctattgatggcaccgtttgtggttatcggactattctcg
cttcgcggtctggcaaacttcctatcgacttactgtatatcctacatgagtgcgcgggtg
atcatggatatgcgccaagaggtgtttgagcattacctgactctacctgtgagctacata
gataaagaaaacactggtaaccttatctctcgtgtcacctatgacacagagcagatcgcg
cgcgcgtcgggcagtgcgcttatcactatcgttcgtgacagtattactgttgtcggcatg
attgcaatcatgttctatttctcttggaaattgtctttggttatcttggttgtaggcccc
attatcggtgtggtgattactgtcgtcagccgccgctttagaaaagtctctaagcagatc
caaaccgcaatgggtggtgtgacggctgcgactgagcagatgatcaaaggccataagaac
gtattgtcttttggcggacaagaaacagaagcccagcgctttgctaaagtgaacgatcaa
aatcgttatcaaacaatgaaactggctacggcgcaagcgattagtcagccagtcgtgatg
attattggctcatttgcattggcatttgttttatatgccgcaagtatcgaaagcatgaaa
gctgagctaacagcgggtacttttgccaccatattaggtgccatgcttgccatgctacag
ccgattaaaaacctcacccgtgttaacgcagaatttcagcgcggtattgccgcctgtacc
acggtatttgagttactcgatacagagccagaaagtgatacgggaacgttggaagttgac
cgtgttaaaggtgagctggcctttaacaacgtggactttagttatccaggccacgagaaa
ctggcacttaatggcatcgactttaaagttgagcaagggcaaaccttggccttagtggga
cgttcaggctctggtaagtcgaccatcgcaagcttaatcactcgcttctacaccggtctt
aaggcgggtgaaattacgcttgatggtcacaatatcaatgattacaaactgaagtcgctg
cgaagccaagttgcgttagtgtcacagcaagtgacgctgtttaatgacagcatcgctaat
aacatcgcttatgcttacccaggcgtggcgactaaagagcagatcatcgaagcggcgaca
ctcgctcatgctatggagtttatcgagcctatgcctgaagggttagatacccaaattggt
gagaatggcgtgatgctctctggtgggcaaagacagcgaattgccattgcacgagcaata
ctacgtaactcgcccgtgcttatacttgatgaagcaacctctgcacttgatactgagtca
gaaaaggcgattcagcaagggcttgataacctacgtcaaaaccgaacctctatcgtgatt
gcccaccgtttgtcgaccattgaaagcgccgatcaaattcttgtggttgatcagggacag
attgtagagcgtggcactcatgtatccttgcttgctaagggtggcgtttacgccaacctg
tatcagatgcagtttggtagctag
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