Shewanella halifaxensis: Shal_2615
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Entry
Shal_2615 CDS
T00654
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shl03009
]
Shal_2615
Enzymes [BR:
shl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Shal_2615
Ribosome biogenesis [BR:
shl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Shal_2615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABZ77171
UniProt:
B0TKW9
LinkDB
All DBs
Position
complement(3175964..3176836)
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AA seq
290 aa
AA seq
DB search
MSEKLQKVLARAGHGSRREMEAWIAAGRVSVDGEIASLGDRVETDAKIRIDGRTVSIRSE
EDVVCRVIAYHKPEGEICSRKDPEGRPTVFDRLPKTRDSRWVAVGRLDINTSGLLLFTSD
GELANRLMHPSNEVEREYAVRTFGEVNDACIQRLRMGVTLEDGPANFDKVKAAGGEGMNK
WWHVSLAEGRNREVRRLWESQEVQVSRLIRIRYGMIELPKSLPRGGWIELPIEQVNYLRK
TAGMDEETRSILGTDKHSVARNKVRSAKIKRAVHKHKVASGRPKPSRQRS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaattgcagaaagtcttggcccgtgcaggccatggctcccgtcgtgagatg
gaggcatggattgctgcaggtcgagttagtgttgacggtgaaattgcaagcctaggcgat
cgcgttgaaactgacgctaaaattcgtatcgatgggcgtacagtttctattcgttctgaa
gaagatgtggtgtgccgagtgatagcgtaccataagcctgaaggtgagatctgtagtcgt
aaagatccagaaggtcgcccaacggtatttgatcgtctaccaaaaactcgtgattcacgc
tgggttgcagttggacgattggacattaacacttcaggtctattattgtttacctctgac
ggtgaactagcaaaccgcttgatgcacccatcaaatgaagttgagcgtgaatacgctgta
cgtacttttggtgaggttaatgacgcatgtattcagcgtctgcgtatgggcgtgacccta
gaagatggccccgcgaactttgacaaagttaaagccgctggtggcgaaggcatgaacaag
tggtggcacgttagcttagctgaaggccgtaatcgcgaagttcgtcgtctatgggaatct
caagaagttcaagtaagccgtcttatccgtattcgttacggtatgattgagctgcctaaa
tctctacctcgtggtggttggattgagctgccaattgaacaagtgaactacttacgtaag
actgccggtatggatgaagaaacacgttcaatactgggtaccgataagcacagtgttgct
cgtaataaagtacgtagcgcaaaaattaaacgtgccgtgcataaacataaagttgcttcg
ggtagaccaaagccatcgcgtcagcgtagctaa
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