Shewanella halifaxensis: Shal_2670
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Entry
Shal_2670 CDS
T00654
Name
(GenBank) fatty acid oxidation complex, alpha subunit FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
shl
Shewanella halifaxensis
Pathway
shl00071
Fatty acid degradation
shl00280
Valine, leucine and isoleucine degradation
shl00310
Lysine degradation
shl00362
Benzoate degradation
shl00380
Tryptophan metabolism
shl00410
beta-Alanine metabolism
shl00640
Propanoate metabolism
shl00650
Butanoate metabolism
shl00907
Pinene, camphor and geraniol degradation
shl00930
Caprolactam degradation
shl01100
Metabolic pathways
shl01110
Biosynthesis of secondary metabolites
shl01120
Microbial metabolism in diverse environments
shl01200
Carbon metabolism
shl01212
Fatty acid metabolism
Module
shl_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Shal_2670
00650 Butanoate metabolism
Shal_2670
09103 Lipid metabolism
00071 Fatty acid degradation
Shal_2670
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Shal_2670
00310 Lysine degradation
Shal_2670
00380 Tryptophan metabolism
Shal_2670
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Shal_2670
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Shal_2670
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Shal_2670
00930 Caprolactam degradation
Shal_2670
Enzymes [BR:
shl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Shal_2670
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Shal_2670
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Shal_2670
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
ABZ77223
UniProt:
B0TL21
LinkDB
All DBs
Position
complement(3238430..3240556)
Genome browser
AA seq
708 aa
AA seq
DB search
MDMEKTFNLTRRDDGIAILTMDVPGETMNTLRSEFGPEISDVLAEIKADTSIKGLVLVSG
KKDSFVAGADISMLDACETATDAKQLSQQGHVVFNELESLPIPVVAAINGACLGGGLELA
LACHKRVCSLNPKTMMGVPEVQLGLLPGGGGTQRLPRLVGVTTALDMMLTGKQLRPKQAL
KMGLVDDAVPESILLRTAVEMALAGKRPAKKKHQSFFNKVLEGTSAGRNIIFDQAGKQVA
KKTQGNYPAPAKIIDCVRQGMTKGMAKGLEVEASHFADLVMSKESGAMRSVFFATTEMKK
ETGAGDVEPQKVNKVMVLGGGLMGGGIASVTTTKAKIPARVKDISETGLSNALAYAYKLL
DKGVKRRHMTPAVRDNLMALMTTTTEYKGIKDADIVVEAVFEDLALKHQMVKDVERECGE
HTIFASNTSSLPIGQIAEAASRPENVIGLHYFSPVEKMPLVEVIAHEKTSAETIATTVAF
AKKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHLDKALIKFGFPVGPMTLL
DEVGIDVGAKISPILEKELGERFKAPTAFDKLLADDRKGRKNGKGFYLYGGKKKAKEVDQ
TVYSVLGLKPGVDTEATEVAQRCVVQMLNEAVRCLEESIIACPRDGDIGAIFGIGFPPFL
GGPFHYIDTLGAANLVKILENYQSRYGSRFEPAAKLKQMAEEGTRFFS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggacatggaaaagacatttaatttaacgcgccgcgatgatggtattgccatattaact
atggatgtgccgggcgaaactatgaataccctgcgtagcgaatttgggcctgagatcagt
gacgtactcgccgaaatcaaagccgatactagcattaaaggtttggtattagtctcgggt
aaaaaggactcgtttgttgctggcgccgacatttcgatgcttgatgcatgtgaaactgca
accgatgcaaagcagttatctcagcagggacatgtagtatttaatgagctggaaagctta
ccaatccctgttgttgcagcgattaacggcgcttgcctaggtggtggcttagagcttgct
ttggcttgtcataagcgagtgtgttcacttaatccaaaaactatgatgggtgtaccagaa
gttcaattaggtttgctgccaggtggcggtggcactcagcgtttaccgcgtttggttggc
gtcacgactgcgcttgatatgatgctaacgggtaagcaactgcgtccgaagcaagcatta
aagatgggcttagtcgatgatgctgttccggagtcaattttactgcgaactgctgtagaa
atggccttagcgggtaaacgtccagcgaagaaaaagcatcaatcattctttaataaagtg
cttgaaggcaccagtgctggtcgaaatattattttcgatcaggcaggtaagcaagttgcg
aaaaagactcaaggtaattaccccgctcccgcgaaaattattgactgtgttcgccaaggc
atgaccaagggaatggcgaaagggcttgaagttgaagcgagtcactttgccgaccttgta
atgtcgaaagagtctggagcaatgcgaagcgtcttttttgcgaccaccgagatgaaaaaa
gaaacgggcgctggtgatgttgagcctcagaaagttaataaggttatggtattaggcgga
ggcctaatgggtggcggtattgcctcggtgacgacgactaaggctaagatccctgctcga
gttaaagatatcagcgagacaggactgagtaacgcgttagcttatgcctacaaactcctc
gacaaaggggttaagcgccgtcatatgacgcctgctgttcgcgacaatttaatggcactc
atgacaacgacgacagaatataaaggcattaaagatgccgatattgttgtagaggccgtt
tttgaagacttagcgctgaagcatcaaatggttaaggatgttgaacgtgaatgcggcgag
cacactatttttgcttcaaatacttcctctttgccaatagggcaaattgctgaagcggcc
agccgaccagaaaatgtcatcggtttacactacttctcgccagttgagaaaatgccatta
gttgaagtgattgcccacgaaaaaacctcggcagaaaccatcgcaaccacggtggcattc
gctaagaagcagggcaaaacaccgattgtagttcaagatggcgcaggcttttatgtaaac
cgtattctggcactttatatgaacgaagctgcccagctcttactcgaagggcagagcgta
gagcatctcgacaaggctctgatcaagtttggcttccctgttggacccatgacgctcttg
gatgaagtcggtatcgatgtcggtgctaagatctcacccattcttgaaaaagagttaggt
gagcgttttaaagcaccaaccgcattcgataagcttttagccgatgatagaaagggccgt
aagaatggcaaaggtttctatctttatggtggaaagaagaaggccaaagaggtcgatcag
actgtttatagcgttttaggacttaagcctggtgtcgataccgaagcgactgaagtggct
cagcgctgcgtagtacagatgcttaacgaagcggtacgctgcttagaagagagcattatt
gcttgtccaagagacggtgatattggtgcgatatttggtattggtttcccacctttcctc
ggtggacctttccattatattgacacgctaggcgctgcgaacttagttaagatcttagaa
aactaccagtctagatacgggagtcgttttgagccggctgccaaacttaaacagatggcg
gaagagggaacacgcttcttcagttag
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