Shewanella halifaxensis: Shal_2708
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Entry
Shal_2708 CDS
T00654
Name
(GenBank) amino acid permease-associated region
KO
K20265
glutamate:GABA antiporter
Organism
shl
Shewanella halifaxensis
Pathway
shl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Shal_2708
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shl02000
]
Shal_2708
Transporters [BR:
shl02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Shal_2708
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AA_permease_2
AA_permease
ECSCR
Motif
Other DBs
NCBI-ProteinID:
ABZ77261
UniProt:
B0TLN9
LinkDB
All DBs
Position
3286801..3288315
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AA seq
504 aa
AA seq
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MKQTEKKGISIFALAMLNVVAVVSLRGLPAEAEYGLSSIFYYIFAAIVFLVPVSLVAAEL
ATGWSEKGGVFRWVGEAFGPKLALIAIFMLWIEVTVWFPTALTFGSVSLAFMGPNQTWDQ
SLSENKFFVLAIVLAIYWLATFVALRGTEAFAKLAKWGGLIGTVIPGVILIVLGFSYLFA
GNTPQIELAWKDVIPDFSNFNNVVLAASIFLFYAGMEMNAIHVKEVDNAPRNYPIAIGIA
ALGTVLVFVLGTLAIAFVIPQSEINLTQSLLVAYHDMFVWAGIGWAAPVMAACLALGVLA
GVVGWVAGPSSALLVVAKGGYLPRFWQQTNKHGMATHIMMAQALLVTLISTVFVVLPSVQ
AAYQILSQLTIVLYLIMYLMMFAAAIYLRYSQPNRPRPYKIPGGSLGMWLIAGLGFIGSL
TAFLFSFIPPSQIAVGSPETFVAILVILTIVFVSIPLLIYKARKPHWRDPEVTDFAPFTW
EIEDKHPGVINPSDKVTHTLHQPN
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaacagaaaaaaaagggatcagcatatttgccttagcaatgcttaatgttgtt
gctgtggtgagtttgcgtggattaccagctgaagcagagtatggtttgagctctatattt
tactatatttttgctgccattgtttttttagttcctgtctctttagtcgctgccgaactc
gcgacgggttggtcagaaaaaggaggcgtatttcgctgggtgggtgaggcatttggccct
aagctagccctaattgctatctttatgctctggattgaggtgacggtttggttcccaacc
gccttaacttttggttcagtctctcttgcgtttatggggccaaatcaaacgtgggatcaa
tccttatctgaaaataaattttttgttctcgccattgtgcttgccatttattggctggca
acatttgtagctctacgcggtactgaagccttcgcaaaactcgcaaaatggggtggtttg
ataggtaccgttattccaggtgtgattcttatcgtattaggtttttcatatctttttgca
ggtaatacgccacagatcgagttagcttggaaagatgtcattcctgacttttcaaacttt
aataatgttgtgcttgctgccagtattttcctcttctatgccggtatggaaatgaatgcc
atccatgtgaaagaggtcgataatgcccctagaaattaccctattgccatcggtattgcg
gcattaggtacggtgctcgttttcgttcttggtacactggcaattgcttttgttattcct
cagtcagagattaacctaacgcaaagcttattagtggcctatcacgacatgtttgtttgg
gcaggtataggctgggcagctccagtgatggcagcatgtttggcacttggcgtattagcc
ggtgttgtaggctgggttgcaggtccatcttctgcgctacttgtagtagcaaaaggcggt
taccttcctcgcttttggcagcaaaccaataaacacggtatggctacgcacatcatgatg
gcacaagcactgttagtgaccttaatttcaacggtatttgtggttcttccctctgtgcaa
gctgcttaccaaatcttgagtcagctaacgattgtactgtatctcattatgtacttgatg
atgtttgctgcagccatatacttacgctacagccagcctaatcgtcctcgtccttataaa
attcctggtggaagtctcggtatgtggttgattgcgggtctaggctttattggctcatta
accgctttcctattttcatttattccaccatcacaaatcgcggtcggtagccctgaaacc
tttgtcgccatcttggtgatcctcactattgtctttgtctctatacccctgctaatttat
aaagcacgtaagcctcactggcgcgatcctgaagtcactgactttgcccctttcacttgg
gaaattgaggataaacatccgggtgtgattaacccatcggataaagtcactcacacttta
catcaacctaactaa
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