Shewanella halifaxensis: Shal_2791
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Entry
Shal_2791 CDS
T00654
Name
(GenBank) OmpA/MotB domain protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shl02000
]
Shal_2791
Transporters [BR:
shl02000
]
Other transporters
Pores ion channels [TC:
1
]
Shal_2791
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OmpA_membrane
DUF2490
Opacity
Porin_4
Motif
Other DBs
NCBI-ProteinID:
ABZ77344
UniProt:
B0TLX2
LinkDB
All DBs
Position
complement(3394896..3395861)
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AA seq
321 aa
AA seq
DB search
MGMSPIKFICFVSIFLLCQDAVAAKSFYSDGDFYFGGKLGGVLLDSEEPLEPGENKMVNL
SSGLTLGYNINSYLSVETDMSYLGQYQDELSGEDKNLFAIGASLSTRYRLSDDAALYVKL
GPAWVEDNVSLSSGLGIKYRLSPNWELDSGYRWIKDTPSTDDDLYEFTLGINYKFGVVSH
QPVRPAVEPTLKHKKKVELLDATSTTAITVSKPVSISAKSLFGFDSSKLVATEALAEVLK
NVIASKDTEICITAYTDSLGAKEYNLTLSKQRAEATRSYFISNGVEPSRIHVDWKGEASP
VATNRTAEGRALNRRVKIELN
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgagcccgataaagtttatctgttttgtcagtatattcttgctctgccaggat
gctgtggcagctaaaagtttttatagtgatggtgatttttattttggtggcaagctgggt
ggcgtattactggacagtgaagagccgctagagccgggggagaacaaaatggttaacctt
agctcgggtttgaccctaggatataacatcaactcttatttatcggtagaaacggatatg
agttatctaggccagtatcaagatgagctatctggagaagataaaaacttatttgcaatc
ggggcttctttgtcgactcgatatcgactcagtgatgatgccgcgctgtatgttaaatta
ggtccagcctgggttgaagataacgtgtcgcttagtagtggtttaggtatcaagtatcga
ctatcacccaactgggagcttgatagcggatatcgctggattaaagataccccaagcact
gatgatgacttgtatgagtttacgctagggattaactataagtttggtgttgtctcacat
cagcctgtacgcccagcggtagagccaacgcttaaacataaaaagaaagttgaactcctt
gacgcaacatcgacaaccgccattacggtatcgaaacccgtatcaatcagtgctaaaagt
ttatttggatttgatagtagtaagcttgttgccactgaagctttagctgaggtgctaaaa
aatgtaatagcgagtaaggatactgagatctgtattaccgcctacactgacagcttaggc
gcgaaggagtataacttaacgctatcgaaacaacgcgccgaagcgactcgaagctatttt
atctccaacggcgtagagccaagccgtatccatgtcgattggaaaggggaggcgagcccc
gtagctacaaacagaaccgctgaggggcgagcgttaaatcgtagagtcaaaatcgagctc
aattaa
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