Shewanella halifaxensis: Shal_2840
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Entry
Shal_2840 CDS
T00654
Name
(GenBank) Microbial collagenase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shl01002
]
Shal_2840
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
shl02042
]
Shal_2840
Enzymes [BR:
shl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
Shal_2840
Peptidases and inhibitors [BR:
shl01002
]
Metallo peptidases
Family M9
Shal_2840
Bacterial toxins [BR:
shl02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
Shal_2840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
PPC
GT-B_Sucrose_synth
Motif
Other DBs
NCBI-ProteinID:
ABZ77391
UniProt:
B0TMN1
LinkDB
All DBs
Position
complement(3453255..3456185)
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AA seq
976 aa
AA seq
DB search
MSTDPTKPQIHTGKFKVHALALACSAILFPGTAFATSEVAPTAKESSKAAHGKELQSRFE
KGANIPGQQKSAEKNQRQHPIKGKAEKKIEGPMGASGPTAEAEDNMCSSELANLSGEALF
DAVRQAEISCISELYSRNDAVSVAAYQTENVVSVANQAAAIAATYDSSTGYEMRNLFYFL
RGAFYIEFYNDDLAYSDTQAADAVYAALVEYAKNPKLFEITPSAGDTLMEFFTSWASSDH
ILESVPVITDYLQMFNADFLASNRHRAAMTSALTTLYYGSWEEAYNSKAMEHGELIDALL
NIATADYIINSDYQYESTDAFHEFGRFYEYQKYWDLPQSLKTRLNDGVELYMSKFERMSA
QWADGAGYLDYYNPGDCEQFGICGWEEELEQTALPINYSCSDTIYIRAQQLTNDELQSSC
DLMGGEETLFHDVLATGYQPVADDLNESLEVNIFDSYDDYAQYASVIFGINTNNGGMYLE
GTPSQEGNHARFIAHEATWTDEILVWNLKHEYVHYLDGRFNLYGAFNYFDIDTGKSVWWT
EGLAEYISKQNRNDGAIELGRSQAYSLSEILSNTYDSGSDRVYSWGYLAVRFLFENHRSD
VDALLVLARGGDADGWLAYIDNTIGQNYNSEWNTWLASVSSNDDSISTGITPPVDSDGDG
VIDSQDAFPHDPSETHDTDGDGVGDNADAFPTDANETVDTDGDGVGDNGDVFPTDPTEWA
DSDGDGIGDNADTDGPVDPVDPVEPVEHCGAISITDGKLTQEQTECVAGSDINYFYTYVE
QDNTPLYITTSGGEGDVDLFFNQEIWAKPSAYTAKATAAGNDEQLNVIANRGWVYISLVA
TAEYEGVSLSVSLTDGGDTGTPPVLVADACATQSPYSYGGVEFGEAVCIADGHSSYYFYV
PAGTEEISVASGHGSGDVNLYGNSQTWAGVDSYEVKSESSGNVESLTIATPVEGWYYISA
DGAPSSEGASLVVDIK
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagatccaactaagccacaaatacacactggtaagtttaaagttcacgcttta
gcgcttgcctgctcagctattctttttcccggtactgcattcgcgacttctgaggtcgca
ccgacggccaaagaatcatcaaaggccgctcatggtaaagagctgcagagccgctttgaa
aaaggcgctaatattccaggccagcagaagagtgcagagaaaaaccaacgtcagcatccg
atcaaggggaaagctgaaaaaaagattgaagggccgatgggagcatctggcccgacagct
gaagccgaagacaatatgtgtagcagtgagttagccaacctaagcggtgaagcgctgttt
gatgccgttagacaagcggagatctcatgtatctctgagttgtactctagaaatgatgcc
gtctcggttgccgcctatcagacagaaaatgtggtttcagttgccaatcaagcagccgct
attgcagcaacctatgacagcagcacaggttacgaaatgcgtaacctgttctacttcttg
cgcggtgcattttatattgagttttacaatgatgatttagcttatagcgacacccaagcc
gcagatgcggtttatgctgcgttagttgaatatgcgaagaatccaaagctttttgagatc
actccttctgcgggtgatactttgatggagttctttacatcgtgggcgagcagcgatcac
atcctagagagtgtgcccgtgatcaccgattacttgcagatgtttaacgcagactttctt
gctagcaatcgccaccgcgccgcaatgacgagcgcattaaccacgctttactacggaagc
tgggaagaggcttacaacagcaaagccatggagcatggcgagctaatcgatgcgctactg
aacattgccactgctgattatattattaactcagactaccagtatgagtcgaccgatgcc
tttcatgagtttggtcgcttctatgagtatcaaaagtactgggatcttccgcaaagcttg
aaaacgcgcctcaatgacggtgttgagctgtatatgagtaagtttgagcgcatgtctgca
cagtgggctgacggtgcaggttacttagattattacaatcctggtgactgtgagcagttc
ggtatttgtgggtgggaagaggagcttgaacaaacggctctaccaatcaattacagctgt
agcgataccatctacattcgcgcccagcagttaaccaacgatgagctccaaagctcttgc
gatcttatgggcggtgaagagacactattccatgacgtgcttgcaacgggttatcagcca
gtagccgatgacttgaatgaaagcctagaagtgaacatcttcgacagttacgatgattat
gcccagtacgcaagtgtgatttttgggatcaataccaacaacggtggcatgtacttagaa
ggcacgccctctcaagagggcaatcatgcacgctttattgctcatgaagccacctggact
gacgagatcttggtgtggaacttaaagcatgagtatgtacattacctcgatggccgtttt
aacctttatggcgcgtttaactacttcgatattgataccggcaagtcggtatggtggaca
gaaggcttggctgaatatatctcgaagcaaaaccgtaatgacggtgctatcgagttgggg
cgctcacaggcttatagcctaagtgagattctctcgaatacttatgatagtggttctgac
cgagtctatagctggggctacttagcggttcgcttcctatttgaaaatcacagaagtgat
gtcgatgcactattagtgctagctcgtggcggcgatgctgatggctggttagcctatatc
gataataccattggccagaactataacagcgagtggaacacctggttggcgtcagtgagc
agtaatgatgactcaatcagcacaggcattactccgccagttgactctgatggagatggt
gttattgatagtcaagatgccttcccgcatgatccgagtgaaactcatgacactgacggt
gatggtgtgggcgataacgccgatgcattcccaaccgatgccaatgaaacagtcgatacc
gacggcgacggtgtcggtgacaatggcgatgtgttcccaaccgatccaactgagtgggct
gattctgatggcgacggaattggtgataatgccgataccgatgggcctgtagaccctgtt
gatccggtagagcctgtcgagcattgcggcgcgatatccattaccgacggtaagttaaca
caggagcagactgagtgtgttgcaggtagtgatatcaactacttctacacctatgttgaa
caagataacacaccgctttatatcacgacatcgggtggtgaaggtgatgttgacctgttc
ttcaaccaagaaatttgggccaagccgtcagcttataccgctaaagcgacagcagcgggt
aatgacgaacagctaaacgttatcgctaaccgaggttgggtatacattagccttgtggca
actgctgagtatgaaggggttagcttaagtgtgagcttaactgatggtggcgatactggc
acgccccctgtgttagtggctgatgcgtgtgcgacacaatctccttatagctatggtggt
gtcgagttcggtgaagccgtctgtattgcagacggccactcaagctactacttctatgtt
ccggcgggtactgaagagattagcgtagccagtggtcatggcagcggcgatgtgaacctt
tatggcaacagccaaacatgggctggagtcgactcgtatgaggtgaagtctgagagtagc
ggtaacgtagagagtctaaccattgccacacctgtggaaggttggtactacatcagtgcc
gatggcgcaccatcgagtgaaggtgcaagcctagtggttgatattaagtaa
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