Shewanella halifaxensis: Shal_2960
Help
Entry
Shal_2960 CDS
T00654
Name
(GenBank) prolyl-tRNA synthetase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
shl
Shewanella halifaxensis
Pathway
shl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Shal_2960
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shl01007
]
Shal_2960
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shl03016
]
Shal_2960
Enzymes [BR:
shl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
Shal_2960
Amino acid related enzymes [BR:
shl01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Shal_2960
Transfer RNA biogenesis [BR:
shl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Shal_2960
Prokaryotic type
Shal_2960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA_edit
HGTP_anticodon
FlaA
TIR_2
tRNA-synt_2
TIR
Motif
Other DBs
NCBI-ProteinID:
ABZ77509
UniProt:
B0TNJ5
LinkDB
All DBs
Position
3598887..3600599
Genome browser
AA seq
570 aa
AA seq
DB search
MRVSKYLLSTQKETPANAEVVSHQLMLRAGMIRRNASGLYSWLPTGLRVLRKIEAIVREE
MNKAGSVEILMPMVQPADLWVETGRFEKFGPELLRFQDRHNRDFVLGPTHEEVITDIVRK
EVNSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHIDQETMDETYEAMFQA
YNNILTRLGLSFRPVMADTGSIGGSMSHEFHVLANSGEDLIAYSTESDYAANIEKCEAPL
PTETRQAATSEMTLVDTPNAKTIAELVEQHGIAIEKTVKTLIVKGATEEAPLVAIVIRGD
HELNEVKAEKLDAVLAPFEFADEAAISDAIGAGTGSIGPVGLNMPVFVDHSVSIMSDFGA
GANQDGKHYFGINWERDLPEAAAFDLRNIIEGEPSPCGKGVIALLRGIEVGHIFQLGTNY
SEAMNANVLDQNGKSKTLLMGCYGVGVSRMVAAAIEQNNDDRGIIWPDAIAPFTVGILPM
NMHKSHRVKDIAEQLYQDLNDAGIEVMFDDRKERPGVMFADMELIGIPHVVVIGDRNIDN
GMFEYKNRRTGEKQDIPLGDIVEFLKAQHA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtaagcaagtacctgctatcaactcaaaaagaaactcctgccaatgcagaagtc
gttagtcatcagttaatgttacgtgcgggtatgatccgtcgtaacgcatcaggcttatat
agctggttgccgacaggtttacgtgtattacgtaaaattgaagcgattgttcgtgaagaa
atgaacaaagcgggctctgtagagatccttatgcctatggttcaacctgcggatctttgg
gttgaaacgggtcgttttgaaaagtttggtcctgaactacttcgtttccaagaccgtcac
aaccgtgacttcgttcttggcccaactcacgaagaagtgatcaccgacattgtgcgtaaa
gaggttaactcatacaagcagttaccacttaacctatatcaaattcaaaccaagttccgt
gacgaagttcgtccacgttttggtgtaatgcgttcacgtgaattcttgatgaaagatgct
tactctttccatatcgatcaagagacgatggacgaaacctatgaggcgatgttccaagcc
tataacaatattttgactcgtttgggcctatccttccgtccagtaatggctgataccggt
tctatcggtggcagcatgtcacacgaattccacgtattagctaacagtggtgaagactta
atcgcttactcaacggaaagtgattacgctgcaaacattgagaaatgtgaagcaccactg
ccaactgaaacacgtcaagccgcaacaagcgaaatgacacttgtcgacacgccaaatgct
aagaccattgccgagcttgttgagcaacacggtattgcgattgagaaaacagttaagaca
ttaatcgttaagggtgcaacagaagaagcaccacttgtggctatcgttattcgtggcgac
catgagctaaacgaagttaaagctgagaagttagatgctgtacttgcgccatttgagttt
gcagacgaagctgctattagtgatgcaatcggtgcaggcactggctctatcggtcctgtt
ggcctaaatatgcctgtctttgttgatcacagcgttagcatcatgagcgactttggcgcg
ggtgcaaaccaagatggtaaacactatttcggtatcaactgggagcgcgatcttccagag
gctgcagcatttgatcttcgtaacatcatcgaaggtgagcctagcccatgtggtaaaggt
gttatcgcacttcttcgcggtatcgaagtcggtcatatcttccagttaggtactaactac
tctgaagcgatgaatgccaacgtacttgaccaaaatggtaagtcaaagaccctgcttatg
ggttgttatggtgtgggcgttagccgtatggttgccgctgcaatcgagcaaaataatgac
gatcgcggcattatctggcctgatgcaattgcaccgttcaccgttggtattttaccaatg
aacatgcacaagtcacatcgcgttaaagatatcgccgagcagctatatcaagacctaaac
gatgcgggtatcgaagtgatgttcgacgaccgtaaagagcgtccaggcgtgatgtttgct
gatatggagcttatcggtattccgcatgttgtggttattggcgatcgtaacatcgataac
ggcatgttcgaatataagaaccgtcgcacaggtgagaagcaagatatcccactaggtgac
attgttgagttcttaaaagcacaacacgcttaa
DBGET
integrated database retrieval system
