Shewanella halifaxensis: Shal_3043
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Entry
Shal_3043 CDS
T00654
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
shl
Shewanella halifaxensis
Pathway
shl00250
Alanine, aspartate and glutamate metabolism
shl00410
beta-Alanine metabolism
shl00430
Taurine and hypotaurine metabolism
shl00650
Butanoate metabolism
shl01100
Metabolic pathways
shl01110
Biosynthesis of secondary metabolites
shl01120
Microbial metabolism in diverse environments
shl02024
Quorum sensing
Module
shl_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Shal_3043
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Shal_3043
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Shal_3043
00430 Taurine and hypotaurine metabolism
Shal_3043
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Shal_3043
Enzymes [BR:
shl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
Shal_3043
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
DUF5393
DUF2922
Motif
Other DBs
NCBI-ProteinID:
ABZ77591
UniProt:
B0TPE4
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All DBs
Position
complement(3712822..3714216)
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AA seq
464 aa
AA seq
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MPLHSKDTVRDDLLDDIYSSTDLALSMPKYKMPEQENNSRHAYQIVHDELMMDGNSRQNL
ATFCQTWVEDEVHQLMDECIDKNMIDKDEYPQTAELEARCVHMLADLWNSPDAENTLGCS
TTGSSEAAMLGGMALKWAWRKKMKALGKPTDKPNMICGPVQVCWHKFARYWDIELREIPM
EGDRLIMNAEEVIKRCDENTIGVVPTLGVTFTCQYEPVKAVHDALDQLQKDTGLDIPMHV
DAASGGFLAPFCQPDLEWDFKLPRVKSINASGHKFGLSPLGVGWVIWRDASVLDEDLIFN
VNYLGGNMPTFALNFSRPGGQIVAQYYNFLRLGKEGYRKIHQACYDTAQYLSSEIEKLGM
FEIIYDGHGGIPAMSWSLKEGVDPGFNLFDLSDRIRSRGWQIAAYAMPPKREDLVIMRIL
VRHGFSRDQADLLVADLKHCVDFFASHPISHGSDAKESSGFNHG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttcactcaaaagatactgtgcgagacgacctcttagatgatatctactcatcg
acagatttagctttatctatgcctaaatataagatgccggagcaggaaaataattctcgc
cacgcatatcaaatcgtacacgacgagctgatgatggacggaaactcccgtcaaaatctt
gcgacattttgccaaacctgggttgaggatgaagttcatcaattgatggacgaatgtatc
gataagaatatgatcgataaggatgaataccctcaaaccgcagagcttgaagcccgctgt
gtgcatatgcttgccgatctatggaactcgccggatgcagaaaacacattaggttgctct
acgacaggctctagtgaggctgcgatgttaggcggtatggctcttaagtgggcttggcgc
aagaaaatgaaagcgctgggtaaacctactgataaacccaatatgatttgtggaccggtg
caggtttgctggcataaattcgcgcgttattgggacatagagttacgtgagatcccgatg
gaaggcgatcgtttaatcatgaatgctgaagaagtgattaagcgatgtgacgaaaatacc
ataggcgtagtgccaacattaggcgttacctttacctgccagtacgagcctgtaaaggct
gtacatgatgcgctcgatcagctgcaaaaagataccggattggatattccaatgcatgtt
gatgccgcaagcggtggctttttagcgccattttgccaaccagatctagaatgggacttc
aaactaccacgcgttaagtcgattaatgcgtcaggacataaatttggcttgagtccactc
ggtgtaggttgggttatttggcgcgatgcttcagttttagatgaagacctcatttttaac
gtgaactacttaggcggtaatatgccgacctttgcattgaacttctctcgccctggtggg
cagattgtcgcgcagtattataatttcttacgtttaggtaaggaaggctatcgtaagatc
catcaggcttgctacgacacggcgcaatacctgtcgagcgagattgaaaaattaggcatg
ttcgagattatctatgatggccatggcgggatccctgcgatgagttggtccttaaaagag
ggcgttgatcctgggttcaacctgtttgatctctcggatcgtatccgctctcgaggttgg
cagattgcagcctatgcaatgccgcctaaaagagaggacttagtcattatgcgtattttg
gttcgccatggctttagccgagatcaggcagacctcctagtggcagatttgaagcattgt
gtcgacttctttgcctcccatccgatttcacacggcagtgatgccaaagagtcatccggt
ttcaatcatggttaa
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