Shewanella halifaxensis: Shal_3073
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Entry
Shal_3073 CDS
T00654
Name
(GenBank) transcriptional regulator, LysR family
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shl03000
]
Shal_3073
Transcription factors [BR:
shl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Shal_3073
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Par3_HAL_N_term
KDM5_C-hel
HTH_5
HTH_34
Motif
Other DBs
NCBI-ProteinID:
ABZ77621
UniProt:
B0TQ29
LinkDB
All DBs
Position
complement(3749686..3750597)
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AA seq
303 aa
AA seq
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MARRLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEYLGLKLFRRKNRSL
LLTEEGQSYFLDIKDIFTQLADATDRLLARSAIGSLTVATSPSFAIQWLVPRLAKFSEKN
PEIDVRIKAVDDEDSSLTDDVDVAIYYGMGNWPGMRADKLRNEVLIPVCSPLLLNGPKPL
EKPSDLKNHTLLHDSSRQDWLAWFRQCGITDINVNQGPIFSHSSLVLQAAAHGQGVALGY
SVLARPDIKAGRLVCPFPEVLVSKNAYYLVCQQNHAEIGKVAAFREWMLDMFEEETRSEL
LTG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacgattacctcccctaaatgctgtaaaggcatttgaggctgcagcaaggcat
ttaagcttcactcgagcagctgaagagttgtttgttactcaggctgcagtgagtcatcaa
attaaagcgttagaagagtatcttggattaaaattattccgtcgcaagaaccgttcattg
ctgttaaccgaggaggggcaaagctactttctcgatatcaaagatattttcactcagctt
gcagatgcgaccgataggttattagcaagaagcgccatcggctcgcttacagtggcgact
tcgcctagctttgctattcaatggctcgtaccgagactcgccaaatttagcgagaaaaat
ccagagatcgatgtcagaattaaagcggttgatgacgaggatagctcgctcaccgatgat
gtcgatgtcgccatctattatggcatgggtaactggcctggaatgcgtgccgataagtta
agaaatgaagtattaattccggtctgttcacctttattactcaatggtcctaagccgtta
gagaagccgagcgatcttaaaaatcacaccttattacatgactctagccgccaagattgg
ttggcttggtttaggcagtgtggaattactgatattaatgtgaaccaggggccaatattt
agtcattcttcacttgtgttgcaagcggccgcccacggtcaaggtgtggcgctaggctac
agtgtgcttgcaaggcccgacattaaagcaggacgattggtgtgtccattccctgaagtt
ttagtcagtaagaatgcatattatctagtgtgccagcaaaaccatgccgagataggtaag
gttgcggcctttagagagtggatgcttgacatgtttgaagaggagacccgtagtgagctg
cttacaggataa
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