Shewanella halifaxensis: Shal_3078
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Entry
Shal_3078 CDS
T00654
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
shl
Shewanella halifaxensis
Pathway
shl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Shal_3078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shl03400
]
Shal_3078
Enzymes [BR:
shl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Shal_3078
DNA repair and recombination proteins [BR:
shl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Shal_3078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
YihI
KxDL
DUF6730
Motif
Other DBs
NCBI-ProteinID:
ABZ77626
UniProt:
B0TQ34
LinkDB
All DBs
Position
3754982..3755230
Genome browser
AA seq
82 aa
AA seq
DB search
MIIVAKKPENLSFEDSLSELEKIVTDLEHGDIALDDALKQFERGIKLVRNSQSKLENAQQ
KVAVLMQEEGVDTLKPYDIEGE
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtggcaaaaaaaccagaaaatctctcatttgaagattcactttccgagcta
gaaaaaatcgtaaccgacttagagcatggcgatatcgctctcgatgatgccttaaagcaa
ttcgaacgcggaattaagcttgttcgaaatagccagagcaagttagaaaatgctcagcaa
aaagtagccgtgttaatgcaagaagagggtgtagacactctcaaaccttatgatatcgag
ggtgagtaa
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