Shewanella halifaxensis: Shal_3141
Help
Entry
Shal_3141 CDS
T00654
Name
(GenBank) Tetratricopeptide TPR_2 repeat protein
KO
K05803
lipoprotein NlpI
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
Shal_3141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_11
TPR_8
TPR_16
TPR_9
TPR_12
DUF4167
Motif
Other DBs
NCBI-ProteinID:
ABZ77688
UniProt:
B0TQ96
LinkDB
All DBs
Position
complement(3834066..3834959)
Genome browser
AA seq
297 aa
AA seq
DB search
MNQKIRTAVVVAMVSVSMLLTGCVSTQSGSEQQASIRVAPVSPDYKLEITLAKLNEILAS
VELTPEQRARFHYDRGVIYDRVGLRILSRIDFHQALKLQPNLADAYNFLGIYYTQESEFE
SAYEAFDAVLELSPDYDYAFLNRGISLYYGERMELAVSDMSTFYEREPSDGYRALWLYLV
EREIDEQNAQAQLATNREKLQSDAWSTALVDYYLGQKSKEDVFSLAKEGLKHPNEYAERL
CEAYFYMAKIAQKQGDNVLAANYFRLALATNIYDFVEHRFARLELARTNEALKLAIN
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaagatacgaacagctgtagtcgtggctatggtaagtgtgagtatgctgctg
acaggatgtgtgtccactcagtcaggtagtgaacaacaagcatcgattagggttgcgcct
gtttcgcctgattataaattagaaattaccttagctaagctaaatgagatattagccagc
gttgagttaacgcctgagcaaagggctcgttttcattatgaccgtggtgttatctatgat
cgtgtaggcctgcgtatattaagtcgtatcgatttccatcaggcactcaagcttcaacca
aacttagccgatgcttataacttcctcggaatttattacacccaagagagtgagtttgaa
agtgcttatgaagcatttgatgctgttttagagctgtctcctgattatgattacgccttt
ttaaatcgagggatttcgctttattatggtgagcgcatggagctcgctgtatcagatatg
agcaccttctatgagcgtgaaccatcagatggctatcgtgcattatggctatatttagtc
gagcgcgaaattgatgagcagaatgctcaagcacaactagcgaccaaccgcgaaaaacta
cagtcagatgcttggtcaacggctctagttgattactacttaggtcaaaaaagtaaagaa
gatgtttttagcttagcaaaagaggggctaaagcaccctaatgagtatgccgagcgcctt
tgtgaagcctatttttatatggctaaaattgcacaaaagcagggtgataacgtactggca
gccaattactttaggctggcattggcaaccaacatctatgactttgttgagcaccgcttt
gccagacttgaacttgcaagaacaaatgaagcacttaagctagcgattaactaa
DBGET
integrated database retrieval system
