Shewanella halifaxensis: Shal_3148
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Entry
Shal_3148 CDS
T00654
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shl03021
]
Shal_3148
03009 Ribosome biogenesis [BR:
shl03009
]
Shal_3148
Transcription machinery [BR:
shl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Shal_3148
Ribosome biogenesis [BR:
shl03009
]
Prokaryotic type
rRNA transcription factors
Shal_3148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
DUF2187
KH_KhpA-B
KH_2
Glyoxalase_4
Motif
Other DBs
NCBI-ProteinID:
ABZ77695
UniProt:
B0TQA3
LinkDB
All DBs
Position
complement(3844083..3845582)
Genome browser
AA seq
499 aa
AA seq
DB search
MNKEILLVAEAVSNEKGVPREKIFEALEIALATATKKKYEGDIEVRVAIDRKTGAYETFR
RWMVVEDAGVPLENPFREITLEAAKYDDPEIELGGYIEDEIDSVAFDRITTQTAKQVIVQ
KVREAERAQIVDQFRDREGELIVGVVKKSNRESVVVDLGNNADGVLFREDLISRESFRPG
DRVRALLYSVRPEARGAQLFLTRTKPDMLIELFRVEVPEIQDEMIEIMGAARDPGSRAKI
AVKSNDRRIDPIGACVGMRGARVQAVSNELGGERVDIVLWDDNPAQYVINCMAPADVASI
IVDEDNHSMDIAVEADSLAQAIGRNGQNIRLATQLSGWELNVMTVDDMKAKHQAESVKVV
NLFIQALDVDEDFAQLLSDEGFTSLEEIAYVPESELLEIDGFDEDIVESLRGRAKAAIST
RALATEEALDGAEPSEDLLALEGLDRHLAFVMASKGVITLEDLAEQGIDDLIEIEELTEE
KAGELIMAARNICWFGEEA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagattctgctagtcgctgaggcggtttcaaacgagaaaggtgtaccgcgc
gaaaagatttttgaagcgctggaaattgcactagccacagcaaccaagaaaaaatacgaa
ggtgacattgaagttcgtgttgctatcgaccgtaagacaggtgcttatgaaactttccgt
cgttggatggtagttgaagatgcgggtgtgccattagaaaacccgtttcgtgagatcacg
cttgaagctgctaaatatgacgatccagaaattgagttgggcggttacatcgaagatgaa
atcgattcagttgcatttgaccgaattaccactcaaaccgccaagcaagttatcgtacag
aaagtacgtgaagctgagcgcgcacaaattgttgatcagttccgtgatcgcgaaggcgag
ttgattgttggtgttgttaagaagagcaatcgcgagagtgtggttgttgatcttggcaat
aacgctgatggcgtattgtttagagaagatttgatttcacgtgaatctttccgcccaggt
gaccgtgttcgtgcattactttactctgtacgtccggaagctcgtggtgcacaactattc
ttgactcgtactaaacccgatatgcttattgagctattccgtgttgaagtacctgagatc
caagacgaaatgattgaaatcatgggcgctgctcgtgatccaggttctcgcgctaagatc
gcagttaagtctaacgaccgtcgtatcgatccaatcggtgcctgtgttggtatgcgtggc
gcacgtgttcaagccgtatcaaatgagcttggcggtgagcgcgtcgatatcgtgctttgg
gacgataacccagcacaatacgtgattaactgcatggcaccagcagatgtggcatctatc
atcgttgatgaagataaccactcgatggatatcgccgttgaagcagacagcttagctcaa
gcgattggtcgtaacggtcaaaacatccgtttagcgacacaactttcgggttgggagcta
aatgtcatgactgttgatgacatgaaagccaagcatcaagctgaaagtgttaaagttgtg
aatctgttcatccaagcgctagacgttgatgaagattttgcacaactgctatctgatgaa
ggcttcacttctctagaagagattgcctatgtaccagaatcagagctactagaaattgat
ggattcgacgaagatatcgttgagtcattaagagggcgcgcaaaagcggcgatctctact
cgcgcacttgcgactgaagaagcactagatggtgctgaaccaagtgaagatcttctagca
ttagaaggtttagatagacacttggcattcgtaatggcaagcaaaggcgttattacgctt
gaagatttagccgaacaaggcattgatgatttgatcgaaattgaagaattaacagaagaa
aaagcaggtgagctaattatggctgcccgtaatatctgttggtttggcgaagaagcataa
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