Shewanella halifaxensis: Shal_3206
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Entry
Shal_3206 CDS
T00654
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
shl
Shewanella halifaxensis
Pathway
shl00541
Biosynthesis of various nucleotide sugars
shl01100
Metabolic pathways
shl01250
Biosynthesis of nucleotide sugars
Module
shl_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Shal_3206
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shl01005
]
Shal_3206
Enzymes [BR:
shl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
Shal_3206
Lipopolysaccharide biosynthesis proteins [BR:
shl01005
]
Lipid A
Shal_3206
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
ABZ77753
UniProt:
B0TR22
LinkDB
All DBs
Position
complement(3910297..3911145)
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AA seq
282 aa
AA seq
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MSNKIISLGSIEIANDKPFVLFGGMNVLESRDLAMQIAETYAEVTQKLGIPYVFKASFDK
ANRSSVNSYRGPGMEEGLKIFEEIKSTFNLPLITDVHEVQQCAPVAEVVDVIQLPAFLAR
QTDLVVAMAKTGAIINVKKPQFLAPHEMRHIITKFNEAGNDEIMLCERGSSFGYNNLVVD
MLGMDEMKQTGYPVIFDATHALQRPGGRSDSAGGRRAQATELARSGMALGLAGLFIEAHP
DPDNAKCDGPCALPLHQLENYLTQMKAVDDLVKSFEPIDTSK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataaaatcattagtttaggttcgattgaaatcgcaaacgataagccatttgtg
ctgtttggcggcatgaacgtacttgagtcacgcgacttggcaatgcaaattgcagaaacc
tatgccgaagtcactcaaaagctagggatcccttatgtttttaaggcttcttttgataaa
gcaaaccgctcatcagttaactcttaccgtggtccgggcatggaagaaggcttaaagatt
tttgaagagattaagtctacctttaatctgcctttgattaccgatgtacatgaagttcag
cagtgtgctcctgtggctgaagtggttgatgtgatccagttacctgcattcttagctcgc
caaaccgatcttgtcgtggcgatggcaaagactggcgccattatcaacgtcaaaaaaccg
cagttcttagcgccgcatgagatgcgtcatatcatcactaagtttaatgaagccggtaat
gatgaaatcatgctatgtgagcgtggctcaagctttggctacaacaatctagtggttgat
atgctaggtatggatgagatgaagcaaacgggttatccggtaatcttcgatgcgactcat
gcgctgcagcgtccgggtggccgaagtgatagtgctggtggacgtcgtgctcaagcgaca
gagcttgcccgtagtggtatggctcttggcttagcgggcttgtttattgaagcacatcct
gatccagataacgctaagtgtgacggtccgtgtgcattgccactacatcagttagaaaat
tatctaactcagatgaaggcggttgatgatctggttaaatcatttgagccaatcgatacc
agtaagtaa
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