Shewanella halifaxensis: Shal_3237
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Entry
Shal_3237 CDS
T00654
Name
(GenBank) rare lipoprotein A
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shl01011
]
Shal_3237
Enzymes [BR:
shl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Shal_3237
Peptidoglycan biosynthesis and degradation proteins [BR:
shl01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Shal_3237
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
LAGLIDADG_2
Motif
Other DBs
NCBI-ProteinID:
ABZ77784
UniProt:
B0TR53
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All DBs
Position
3943600..3944382
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AA seq
260 aa
AA seq
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MPRNNTLAILVLTATLAACSSGGRYELDDDKAPTSAPDVTKVEDAHPKYEPYSRGGNKKN
YTVLGKSYQVMDTGEGYAEKGIASWYGAKFHGHLTSNGETYDMYSMSAAHKTLPLPSYVK
VTNLKNDKTVIVRVNDRGPFHEDRIIDLSYAAAHRLDMLKTGTANVSLEVIYIADPESTA
LAELKGTELHYIQVVASSSKERLENLANSLEKKYQVKSRVQSVNSLYRLQLGPIGQQQLA
NKLTEKLKQEGYPQSYLLTE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcaataatacccttgccattttagtcttaacagccaccctagccgcatgctct
agcggtggtcgctacgaacttgatgacgataaggcgccgacatccgcacctgatgtgacc
aaagttgaagatgctcatcccaaatatgagccatacagtcgtggtggtaacaaaaaaaac
tacaccgtacttggtaagagttaccaggtcatggatacgggtgaaggctacgcagaaaaa
ggcatcgcctcatggtatggcgccaagtttcatggacaccttacgtccaatggtgaaacc
tacgacatgtactctatgtcggcggcccataagacgctgccgctgcctagctatgtgaag
gtgactaaccttaagaacgataagacggtcatagtgcgggttaacgatagaggaccgttt
catgaggaccgtattatcgatctgtcctatgctgcagctcaccgcctagacatgctcaaa
actggtactgcaaatgttagcctagaagtgatctatattgccgatccggagtcaacagca
ctggctgaactcaaaggcacagagcttcactatattcaggtggtagcatcatctagcaaa
gaacgcttagaaaacttagctaatagcttagagaaaaagtaccaagttaagagtcgagtt
caaagcgtaaacagcttgtaccgcttgcaattagggcctattggccaacagcaacttgca
aacaagctgacagaaaaactcaagcaagagggttaccctcaaagttacctgcttactgaa
tga
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