Shewanella halifaxensis: Shal_3537
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Entry
Shal_3537 CDS
T00654
Name
(GenBank) protein of unknown function RIO1
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
shl
Shewanella halifaxensis
Pathway
shl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Shal_3537
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
shl01001
]
Shal_3537
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shl03009
]
Shal_3537
Enzymes [BR:
shl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
Shal_3537
Protein kinases [BR:
shl01001
]
Serine/threonine kinases: Other
RIO family [OT]
Shal_3537
Ribosome biogenesis [BR:
shl03009
]
Eukaryotic type
Pre-40S particles
Kinases
Shal_3537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
APH
TCAD9
Kdo
Pkinase
YrbL-PhoP_reg
Motif
Other DBs
NCBI-ProteinID:
ABZ78080
UniProt:
B0TTD9
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All DBs
Position
4314131..4314991
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AA seq
286 aa
AA seq
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MKTPKRLQPLVDEGLIDEVIRPLMSGKEADVYIVRCGDDVRCAKIYKEADKRSFKKAVEY
REGRKGRNSRRARAMEKGSNYGRQEQEQAWQNAEVDALFRLANAGVRVPTPYGCFDGVLL
MELITDEAGYVAPRLNDVTLSADMAIAHHAMVMKDVQRMLCAGLIHGDLSEFNVLLDHTG
PVIIDLPQAVDAAANNNAKRMLLRDVNNMTQYYGQFAPELLSSKYAQEMWLKFESGKLSP
ETELTGQFVESEQSADIEAVLAEIQAAFEEEQDRKARIQAETEDEF
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccccaaaacgactccaacctttggttgatgaaggactaattgacgaagtcatt
cgtccattaatgagcggcaaagaagccgatgtatacatagttagatgtggcgacgatgtt
cgttgtgccaaaatttataaagaagctgataagcgcagctttaagaaagccgtcgaatac
cgcgaaggacgtaagggtcgcaactctcgtcgagcaagggcgatggagaaaggatctaac
tacggacgccaagaacaagagcaggcgtggcaaaatgccgaggtcgatgcactgtttcgt
ctagctaatgctggcgtacgtgtgcctacgccttatggctgtttcgatggtgtgctacta
atggagcttatcaccgatgaagctggctatgtcgcgccacgacttaacgatgtcactctg
agcgccgatatggccatagcgcaccacgccatggtgatgaaagatgtgcagcgtatgctc
tgtgccggtcttattcacggtgacttatcagagtttaacgtgttactagaccataccggg
cctgtgattattgatctgccacaagcggtcgatgccgcagcaaacaataacgctaaacgc
atgctactacgtgatgtgaataatatgactcagtattatggtcagtttgcaccagaactg
ctgagcagtaaatatgcccaagagatgtggctaaagttcgagtctggtaagttgtcacca
gagactgagttaactggtcagtttgttgagagcgagcaaagcgccgatattgaagctgtg
ctggccgagatccaagccgcgtttgaagaggagcaagatagaaaagcgcggatccaagct
gaaacggaagatgagttttaa
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