Shewanella halifaxensis: Shal_3595
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Entry
Shal_3595 CDS
T00654
Name
(GenBank) ABC transporter related
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
shl03012
]
Shal_3595
Translation factors [BR:
shl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
Shal_3595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
MMR_HSR1
MeaB
AAA_15
RsgA_GTPase
DUF87
Motif
Other DBs
NCBI-ProteinID:
ABZ78136
UniProt:
B0TU25
LinkDB
All DBs
Position
4388246..4390219
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AA seq
657 aa
AA seq
DB search
MGSRLLSVPNICCYSDLKPTSMITITQAQLVRGSKTLLDETSLTVYPGHKVGLVGANGSG
KSSLLALILGKISLDKGEFTMPSGWQMATVAQETPALDVAAIEYVIDGDSEYRELEAQLH
AAQEADDGHKIALLHGKIDAIGGYAIHSRAASLLAGLGFSEQEQRNPVKSFSGGWRMRLN
LAQALLCRSDLLLLDEPTNHLDLDTMYWLEGWIKAYQGTLILISHDRDFIDGIVDEIVHV
ENTKLNYYKGNYTSFERVRAERMAQQQVAFERQQKERAHMQSFVDRFRYKASKAKQAQSR
LKALERMAELLPSQADSPFHMAFREPEALPNPLVTMEQVSIGYGETEILKKVHLNLVPGA
RIGLLGRNGAGKSTLVKLLSGELSPMKGKYETNPGLNIGYFAQHQLEFLSLDDSPLQHMV
RLAPTTKEQELRNFLGGYGFNGDMALAPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTN
HLDLEMRHALTMALQTFEGAMIIVSHDRHLLRLSCSDYYLVDQGEVKSFEGDLDDYHQWL
LDASKTAGKEEDSDASKPVQDKKQQKRLEAELRQKLSPLKKVQAKLEKEQQKANDRLKEL
EDMLADISLYDAENKATLTQVLADRTALTQGLEESEMEWLEIQEEIESIEQGVHAEI
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgggttctaggctattatctgtccccaatatttgctgttactctgacttaaagccgact
tcaatgatcaccatcactcaagctcaactcgttcgtggctcgaaaaccttgctcgatgaa
acttcattaaccgtctatccaggccacaaggtcggcctagtaggagcaaacggcagcggc
aagtcttcattacttgcgcttatcttaggcaaaatcagcctcgataagggtgagtttact
atgcctagcggctggcagatggccaccgtggcacaggaaacaccggcacttgacgttgcg
gcaattgagtatgtgattgatggagatagtgaatatcgtgaacttgaagcacagctacat
gcagcccaagaagccgacgatggccataaaattgcactcttacatggcaaaattgatgcg
attggcggctatgccatacattcacgcgccgcaagcttactcgccggccttgggtttagc
gaacaagagcaacgcaatccagtaaagagcttctcgggtggttggcgtatgcgtcttaac
ttagcccaagcgctgctatgtcgctcagatctactgcttctcgatgagccaaccaaccac
ttggacttagacaccatgtattggttagaaggctggattaaggcttatcaaggtacgcta
attcttatcagtcacgaccgcgactttattgatggcattgtcgatgagatcgtccatgtc
gaaaacaccaagctgaactactacaaaggtaactacacctcgtttgagcgtgtccgtgcc
gaacgtatggcgcagcagcaagtggcatttgagcgtcagcaaaaagagcgcgctcatatg
cagtcttttgttgaccgcttccgttataaagccagtaaggctaagcaggctcaaagccgc
ttaaaagcgcttgaacgtatggcagagctactgccatcacaagctgacagtccgttccat
atggcttttagagagcctgaagctctacctaatccactggtaacaatggagcaagtgtct
atcggttacggtgaaactgagatccttaagaaggttcacctcaaccttgttcccggtgca
cgcatcggtttattgggtcgcaacggtgcgggtaagtcgacgctggtaaagctactttct
ggtgagctgtcaccgatgaaaggcaagtatgaaaccaatccaggcttaaatatcggctat
tttgcccagcatcagctggaatttttaagcttagatgactcaccactacagcatatggtg
cgcctggctccaacgactaaagagcaggagctacgtaacttccttggtggttatggtttc
aatggtgatatggctttagcgccagttagacctttctctggcggcgaaaaagcacgttta
gtattagcacttttagtatggcagcgccctaacctattgctactcgatgaaccgaccaac
cacttagacctagagatgcgtcatgcgctgaccatggcactacagacttttgaaggcgca
atgattatcgtctcacacgatagacacttattgcgtttaagctgtagtgactattatctt
gtcgaccaaggtgaagtcaaaagctttgaaggtgacttagatgattaccatcagtggtta
ctcgatgcgtcaaaaaccgcaggcaaagaggaagacagcgacgcgagcaagcctgttcaa
gataaaaagcagcaaaaacgcttagaagccgagcttagacaaaagctgtcgccacttaaa
aaagtacaggctaagctagaaaaagagcagcaaaaagccaacgaccgcttaaaagagttg
gaagatatgctggctgatatcagcctatatgatgccgagaataaggctacgcttactcaa
gtattagccgatagaaccgctttgactcaaggacttgaagaaagcgaaatggaatggctt
gagatccaagaagaaattgaaagcattgaacaaggtgttcacgctgaaatttaa
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