Shewanella halifaxensis: Shal_3625
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Entry
Shal_3625 CDS
T00654
Name
(GenBank) TonB-dependent receptor plug
KO
K02014
iron complex outermembrane recepter protein
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shl02000
]
Shal_3625
Transporters [BR:
shl02000
]
Other transporters
Pores ion channels [TC:
1
]
Shal_3625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Bombinin
Motif
Other DBs
NCBI-ProteinID:
ABZ78166
UniProt:
B0TU55
LinkDB
All DBs
Position
complement(4421071..4423107)
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AA seq
678 aa
AA seq
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MIKTRNTKIAVIISSLLACQYAVASDTNDVFSLGEIVVSEETGVRDIAINNTMTAEQIEL
IGAKTVADALDYIPGVHVAQSSKGEKFLTIQGFEQDKVLILLDGVPYYETNYGQLDLNQI
PANIIAKIDVVKGASSVLYGPNGMGGVVNIITKKGQEGVSGDLQASFGQMGQNYQSGTLS
LGKNGFSLFASVDHRGRDAMRMSNDFEPVLSDVRDKYGDLPKQMIVEDGGKRENSAYEST
NIWVRGGYANENTELFASVFSLDSDRELPYNTRNNKVFSDFSSFADISEYKDTGMDLSGL
HRVNDWLTVRALGYYHMHNDSYDSYSNPEKDVKLATSSFSDYTAGGALFTDMVLADWNSL
SLSVNFKNDVHKKKNVAYIDTDRSHAYERSQLDTISLAAEDTMTFGALNVVAGIAWHKQT
VVEDRDYDAASGEDGSDTLDPMLGMSYTLDNAGLIYGSIAQKTRFATFTEMYDDTGARHD
IKPERNTSYTLGWKNDFSHQLLNSIDIGLFYHDVSDKIVSTYMPDPTDPDWDLEVYQNVG
SSEFYGIEISTQSQLSENISLSLDYTYTHARNTTDDRDSDYFRDIPKDTVTAIVNWYQPW
LDIDSNLRVRYRTDILIDDRSDEWESETLTIDMGINKSITPQLSAYVNLNNLLDESHYEG
YGQPNEGRSYEVGVKYRF
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaaaacaagaaatactaaaatcgcagtcatcatcagtagtttgttggcatgccaa
tacgcagtggccagtgatacaaatgacgtgttctctctcggtgagattgttgtttcagag
gaaacaggcgttagagatatcgcaatcaataacaccatgaccgcagagcaaattgagctg
ataggcgcaaaaacggtcgccgatgcactcgactatatacctggcgtacatgtagctcaa
tcaagtaagggcgagaagtttctgactattcagggttttgagcaagataaggtgcttatt
ttgcttgatggtgtgccttactatgaaactaactatggtcagttagaccttaaccaaata
cctgccaacatcattgcaaaaattgatgtggttaaaggtgcgtcatcagtgctttatggt
ccaaatggtatgggcggtgtagtcaacatcatcaccaagaaaggccaagagggggttagt
ggtgatctacaagcgtcttttggtcagatgggtcaaaattaccagtcgggtacacttagc
ttaggtaagaacggctttagtctatttgcatctgtcgatcaccgtggccgtgatgcgatg
cggatgtctaatgacttcgaaccagtactgtccgatgtgagagacaagtatggcgactta
ccaaagcagatgatcgttgaagatggtggtaaacgtgaaaactcggcttacgagtcgact
aatatctgggttcgtggtggttacgctaacgaaaataccgaactatttgccagtgtattt
agcttagactcagatcgtgaattgccctataacacccgtaacaacaaggtatttagtgac
tttagtagctttgccgatatctccgaatataaagatacggggatggatttaagtggttta
caccgcgttaatgattggctcactgttcgtgcattaggctactaccatatgcataacgat
agttatgactcctatagcaatccagaaaaagacgtcaaattagcgaccagtagcttcagt
gactacacagcaggtggcgccttgtttaccgatatggtgttagccgattggaacagttta
agcctgtctgtaaacttcaagaatgatgttcataagaagaaaaatgtcgcatatatagac
actgaccgttcccatgcttatgagcgctctcaactcgataccattagtttggctgctgaa
gataccatgacatttggtgcgctaaatgtggttgcaggtatcgcatggcataaacaaacg
gttgttgaagatcgtgactacgatgctgcatcgggtgaggatggttcagatactttagat
cctatgttaggtatgagctacaccttagataatgcaggtttaatctacggttctattgcg
caaaaaactcgtttcgcaacctttaccgaaatgtatgacgatacgggagcacgtcacgac
attaaaccggagcgtaatacgagctataccttaggttggaagaacgattttagccatcag
ttattaaacagtatcgatatcggtctgttttaccatgatgtcagcgataagattgtctct
acctatatgcctgatccaactgatccagattgggatctagaagtttatcaaaacgtggga
agctcagagttttacggcatcgagattagtacccaaagtcagctgagtgaaaatatcagt
ttatctctagattacacttacacgcatgctcgcaataccactgatgatcgtgattctgac
tacttccgtgatattccaaaggacaccgtgactgcgattgttaactggtatcaaccttgg
ctagatatcgacagtaatctgcgcgttcgttaccgcacagatattctgattgatgatcgc
tctgatgagtgggagtctgagaccttaacgattgatatggggattaataagtcgattaca
ccgcagctctctgcttacgttaatcttaataacctactcgatgagtcacactacgaagga
tacggtcagccaaatgaaggccgctcttatgaagttggcgtaaagtaccgcttctaa
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