Shewanella halifaxensis: Shal_3791
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Entry
Shal_3791 CDS
T00654
Name
(GenBank) SNF2-related protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shl03021
]
Shal_3791
Transcription machinery [BR:
shl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Shal_3791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ABZ78331
UniProt:
B0TVM8
LinkDB
All DBs
Position
4606064..4608970
Genome browser
AA seq
968 aa
AA seq
DB search
MPFSLGQRWISDTESELGLGTVVGVEGRMVTVLFPATGENRLFSRTEAPLTRVIYNPGDT
IESHEEWSLVVTEVEEKDSLIIYHGTHSETGEQVSLRETLLNHNIRFNKPQDRLFAGQID
RLDRFNVRYQCQLLRNKLATSDLLGLQGPRVGLIPHQQWIAHEVGQRFAPRVLLADEVGL
GKTIEAGLIIHQQLLTGRAERILVIVPDTLRHQWLVEMLRRFNLRFSVFDEDRCVEAYAD
NDNPFYTEQLVICSLDLLRKKRRLDQALDADWDLMVVDEAHHLEWSEEAPSRAYQIVEAL
SEEIPGVLLLTATPDQLGHQSHFARLRLLDPDRFYDYQAFLKEEDSYKDVATAADALASG
ESLSDESIAGLTQLLSEKDISASIALIQDDSADTDTRLQARDELLQDLLDRHGTGRVLYR
NSRASVKGFPQRNLHVHPQKMPEQYVTAYRVSAMMNKHLDTNAKVRQVLSPEKIYQDFDS
GSASWWKFDPRVDWLIDFLKTNRSKKVLIIASQAETALSLEEALRTREGIQATVFHEGMS
IIERDKAGAYFAQETGGAQALICSEIGSEGRNFQFASNLVLFDLPLNPDLLEQRIGRLDR
IGQKNDVEIHLPYLANTAQERLTEWYHQGLNAFECTCPSGHILFNEFSGELLETLLNNDE
TSLETLLDNTKARYQELKLAMEQGRDKLLEINSHGGERANKLVQSLADKDGDTQLIGSVI
RLWDIIGVEQEDSGENAIVLHPSEHMMFPTYPGLPEDGITVTFDREMALSRDDIALITQE
HPLVQTGLDLITSSETGTTSVAVLKNKALPAGTIFLELIYLADASAPKSSQLYRYLPPTP
VRVLLDKNGNNLSDNVTYESFNKQLSAVNRHIASKLVNASQAILHPLFAKAETFANAELQ
TLTACAREKMTSQLSGELERLKALKAVNPNIRDEELSHLSEQMSELNRYLDSSKLQLDAV
RLVLVSHA
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccgttttccttaggtcaacgttggatcagtgacaccgaatcagaattaggtttaggt
acagtagttggagttgagggccgtatggtcaccgttcttttccctgccactggcgagaat
agactgttttcccgtaccgaagccccgctaacacgtgttatctacaacccaggcgacacc
attgaaagccacgaagagtggagtcttgtcgttactgaagttgaagaaaaagattcactg
attatttaccacggcactcatagcgaaactggcgagcaagttagcctgcgcgaaaccttg
ctgaatcacaatatccgttttaataagccacaagatcgtctgtttgccggccagatcgac
cgtctagaccggtttaatgtgcgctatcagtgtcagctacttcgcaataagctagccaca
tcagatctgcttggactacaagggccacgcgttggattgatcccacatcaacaatggata
gcacacgaagtgggtcagcgttttgcgccccgcgtattgctagccgatgaagtgggtcta
ggtaaaaccattgaagcgggtttgattatccatcagcaattgctgacaggccgtgccgag
cgtatcttggtgattgtgccagacacacttcgccaccagtggttagttgagatgctgcgc
cgctttaacctgcgcttctcggtattcgatgaagaccgctgtgttgaagcttatgccgat
aacgacaaccctttctataccgagcagctagtgatctgttcactggatctactgcgtaag
aagcgccgtttagatcaagccttagatgccgactgggatctgatggtagtggatgaagcg
catcacttagagtggtcggaagaagcaccaagccgtgcttaccaaattgttgaagccttg
agtgaagaaattccaggggtattactacttaccgctacacccgatcagcttggtcaccag
agccactttgctcgcctgcgcctgctcgatcctgatcgtttctatgactatcaagccttc
ttaaaagaagaggacagttacaaagacgtggcgaccgcagccgatgcactagccagtggt
gagtcactgtcggatgaatcgatagcaggtttgacacagctactgtctgaaaaagatatc
agcgctagcatcgcattaatccaagatgacagcgccgacacagacactcgcttgcaagct
cgtgacgaactattgcaagacctgctcgaccgtcacggtactggccgcgtgctttaccgt
aacagccgcgcatcggtaaaaggcttcccacagcgtaatctgcatgtacatccgcaaaag
atgcctgagcagtacgttaccgcttaccgcgttagcgcgatgatgaacaagcatttagac
accaatgctaaagttcgccaagtactcagccctgagaagatctatcaagattttgacagc
ggcagtgcaagctggtggaagttcgatcctcgcgtagattggctgattgatttcttaaag
accaaccgcagcaagaaagtactgattattgctagccaagccgagactgccttgagcctt
gaagaggcgttacgtactcgtgaaggtattcaagcgaccgtcttccatgaaggcatgtcg
attatcgagcgcgataaagcgggtgcttactttgctcaagaaacgggtggtgcacaggca
cttatctgtagcgagattggttctgaaggtcgtaacttccaatttgccagtaacttggtg
ttgttcgatctgccgttaaacccagatctactagagcaacgtattggtcgtctcgatcgt
atcggtcagaagaacgatgttgagatccacctgccttacttagcaaatacggcgcaagag
agattaaccgagtggtatcaccagggcctaaacgcttttgagtgcacttgcccaagtggt
catattctatttaacgagttctctggcgagctgctagaaaccttgctaaataatgatgaa
acgagtctagagacgttactggataacactaaagcgcgctatcaagagctaaagcttgcg
atggagcaaggccgtgacaaactgcttgagatcaactctcatggcggtgagcgtgctaac
aagttagtacaaagccttgcggataaagatggcgatactcagctaattggctcggtaatt
cgtctgtgggacattatcggtgtcgagcaagaagacagcggcgaaaacgcgattgtattg
cacccgagcgaacatatgatgttcccaacatacccaggtctaccagaagatggtattacc
gtgaccttcgatcgtgaaatggcgctgtctcgtgacgatatcgcactgatcactcaagag
caccctctggtacaaacgggtctagacttaatcacctcatcagaaacgggtaccactagc
gtggcagtgttgaagaacaaggcattgccagcaggcaccatattccttgagcttatctac
ctagccgatgcgtctgcacctaagtcgagccagctataccgttacctgccaccaacaccg
gttcgcgtgttgctggataagaacggcaataacttgtctgataatgtgacttacgaaagc
tttaacaagcagttaagtgcggtgaaccgccatattgccagtaagctagtcaatgcatca
caggcgattttacacccgctgtttgctaaggctgaaacctttgccaatgccgagctacag
acgctaacagcttgtgcgcgtgagaagatgaccagccagttatcgggcgagctagagcgt
ttgaaagccctaaaggcggttaacccaaacattcgtgatgaagagctaagtcaccttagc
gagcagatgagcgaactaaaccgatacttagacagcagcaagctacaacttgatgcggtt
agactcgtattagtcagccacgcttaa
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