Shewanella halifaxensis: Shal_3953
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Entry
Shal_3953 CDS
T00654
Name
(GenBank) methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
KO
K03776
aerotaxis receptor
Organism
shl
Shewanella halifaxensis
Pathway
shl02020
Two-component system
shl02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Shal_3953
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Shal_3953
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
shl02035
]
Shal_3953
Bacterial motility proteins [BR:
shl02035
]
Flagellar system
Chemotaxis proteins
MCPs
Shal_3953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
PAS_3
PAS_9
PAS
Cg6151-P
Motif
Other DBs
NCBI-ProteinID:
ABZ78493
UniProt:
B0TJS5
LinkDB
All DBs
Position
complement(4820618..4822171)
Genome browser
AA seq
517 aa
AA seq
DB search
MDEEYQYPANYNLISITSPSSHIKYASPHFSEVAGFADGELVGLPHNVVRHPDMPKAAFK
DLWGHLQSGNHWMGMVKNSRKGGGYYWVDAFASPIKNNGEIVEMQSVRFKPERIHVTRAE
AIYKQLSNDKKPFRLSIGLRTRLWQRSAFFYGIAALVSYAIAMFSQNTAITLASFFVMAT
LISYLLTRPLERLAKESRKEFNNPLMELIYTGKVNDFSEIELAMKMRKQHVKALIGRVNI
SVMEACDKTLDNAKLATENNHKVTEHLNTQKTEIEMVATAVNEMQAASTEISQNAQGTAE
ATMQTQTTMSDNLECINQVNKSMLELVEELASISSTVVSLDKQTQQISSVIDVINGIAEQ
TNLLALNAAIEAARAGDSGRGFAVVSDEVRTLAQRTQVATTEIQTAIEQIQNNSQVAVKS
LEVGNDKSSKTVDIINTSLAKIGELEELIEGIVERNQQIAVAIEEQVYVCNEVNTNVQMV
NCKVSESYDLITVTNTLNQEVESSTSDLSDTIRNFNM
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagagtaccagtatcccgccaattacaatttaatctcaatcacgtctccttct
agtcatattaaatatgccagcccgcatttttctgaagtagcgggatttgcagatggtgag
cttgttggtcttcctcataatgttgttagacatccggacatgccaaaggccgcgtttaaa
gatctttggggtcacttgcagagtggcaaccattggatgggaatggtgaaaaacagccgt
aagggcggaggttattattgggtggatgcattcgcatcgccgataaaaaacaatggtgaa
attgttgagatgcaatcggtgcgctttaagcctgagcgtattcatgtcactagagccgag
gcgatatataagcagctctcaaacgacaaaaaaccctttcgtttaagcatcggcttgaga
acaaggctttggcagcgcagcgcctttttctatggcatcgcggcacttgtctcgtatgcg
attgcgatgttttcccaaaataccgctatcacgctggcatccttctttgtgatggcgact
ctgattagctatctgttaactcgtcccttagagcgactcgcaaaagagtcccgtaaagaa
tttaataacccgctgatggagttaatttacacgggcaaggttaatgatttttctgagata
gagttggcaatgaaaatgcgcaagcaacatgttaaggcattgattggtcgggtcaatatc
tcggtgatggaggcctgtgataagaccttagataacgcaaagttagccacagaaaacaac
cataaagtgactgagcacttgaacacacagaaaacggaaattgaaatggtggccacggca
gtcaatgagatgcaggcggcgtcgactgaaatctcacaaaatgctcagggtactgccgaa
gcgacaatgcagactcaaacgaccatgtcagataacttggagtgcattaaccaggttaat
aagtcgatgctggagctagtggaggagttggcttcaatttctagtaccgtggtatcactc
gataagcagactcagcaaatcagttcggtgatcgacgtgattaatggcattgccgaacaa
accaatttattagcattgaatgcggcgattgaggcggctcgagccggggattctggccgt
ggttttgcggtagtgtctgatgaggtgcgtaccttagcccagcggactcaagtggcaaca
acggagatccagaccgcgatagaacagatccaaaataatagtcaagttgcggttaagtca
ctagaggtcggcaatgacaaatcgagcaagacggtcgatatcatcaatacatcactggct
aaaattggtgaattagaagaactcatagagggcattgtggaacgtaatcagcaaattgcc
gttgcgattgaagaacaagtgtatgtctgtaatgaagtgaacaccaatgtgcagatggtc
aattgtaaggtgtcagaatcttatgatcttattaccgttaccaacactttaaaccaagag
gttgaaagcagcaccagtgacctatccgatacgattagaaattttaatatgtag
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