Shewanella halifaxensis: Shal_4026
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Entry
Shal_4026 CDS
T00654
Name
(GenBank) Radical SAM domain protein
Organism
shl
Shewanella halifaxensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_N
DUF3362
Radical_SAM
B12-binding
DUF5572
Motif
Other DBs
NCBI-ProteinID:
ABZ78566
UniProt:
B0TKI0
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Position
complement(4905346..4907679)
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AA seq
777 aa
AA seq
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MQVESTLFTFPKYRPELTRPAPFLPMSRKEMAKLGWDSCDIIIVTGDAYVDHPSFGMAVI
GRMLEAQGFRVGIISQPDWSNKEDFMKLGKPNLYFGVTAGNMDSMINRYTAERRMRHDDA
YTAGNIGGKRPDRAVTVYTQRCKEAFKQVPVVIGGIEASLRRIAHYDYWSDKVRRSVVLD
AKADILIYGNAERPLVELSHRLAAGEPMSQLHDIRGTAVIRNEPLPEWKGVDSRKLDQLH
KIDPIPNPYGADDVGCKNLSGPTDEKIFDNDAPKAISVQPPRPKPWEKTYVMLPSYEKVL
EDKYLYAHASRILHQEQNPGCARALFQKHAERAVWVNPPAWPLNTDEMDGVFDLAYQRVP
HPSYGKEKIPAYDMIKASINIMRGCFGGCSFCSITEHEGRIIQSRSQESIVKEIKDIQQK
VPGFTGVISDLGGPTANMYHLGCTSEKAESTCRRQSCIYPSICGHMDTDHQPTIDLYRAA
RDVPGIKKVLIASGVRYDLATEDPRYVKELATHHVGGYLKIAPEHTEEGPLNKMMKPGMG
TYDKFKTLFDKYSQEAGKKQYLIPYFISAHPGTTNEDMVNLALWLKAEKFKLDQVQNFYP
SPMANATTIYHTELNSLKNVKHDSEQVTVPKKGRQRKLHKALLRYHDSAGWPLIREALIE
MGKEKLIGNGPSCLVPVETRQEREANRANSKTSNAKDDGKGKKAFTRFSGDQFDDRKSGQ
NKSSQNKSGQKKSGGNKAGQGKPDQNRSGQGAKTGAKPTGKRPPKKNAWGTTPKHQR
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtagaatccacgttatttacctttccaaagtatcgccctgagctcactcgccca
gcgcctttcttacctatgtctcgtaaagagatggctaagttaggttgggatagttgtgac
attattatcgtaacgggcgatgcctacgtggatcatccaagttttggtatggcagtcatt
ggccgcatgctcgaagcccaaggttttagagtggggattatttcccagcctgattggtct
aacaaagaagactttatgaagttaggcaagcctaacctctactttggcgtgactgcgggt
aacatggactcgatgattaaccgctataccgccgagcgccgtatgcgtcatgatgatgcc
tacaccgcgggtaatattggtggtaagcgtcccgatcgcgccgtgactgtctacactcaa
cgctgtaaagaagcctttaagcaagtacctgtagtgataggtggtatcgaggcgagtctg
cgccgcattgctcactacgattactggtccgataaagtgcgtcgcagtgttgttttagac
gctaaagccgatatcttgatctacggcaacgccgaacgtcctttagtggagctttctcat
cgtttggcggctggcgagcctatgtcacagcttcacgatattcgtggtacagcggttatt
cgtaacgagccgctacccgaatggaagggggtggattcgcgcaagctagatcagctacat
aagatcgatccaattcctaatccgtacggcgccgatgatgtgggttgtaaaaacctatca
gggccgacggatgagaaaatcttcgacaatgatgcgcctaaggctatcagcgtccagcct
ccaagacctaagccttgggagaagacctatgtcatgctaccaagctatgaaaaggtttta
gaggacaaatacctgtatgcccatgcctcacgaattttgcatcaagagcagaatccgggc
tgcgcgcgcgcattatttcaaaagcacgccgaacgtgcagtttgggtcaatccaccggct
tggccgctcaataccgatgagatggatggcgtgttcgatctggcatatcagcgtgtgccg
catccgtcctatggcaaggagaagatccctgcctacgacatgattaaggcctcgattaat
attatgcgcggttgttttggtggctgctcattctgctcgatcactgagcatgaagggcgg
atcattcagagtcgttcacaagagtccattgtgaaagagattaaagatattcaacagaag
gtaccgggctttactggggttatctcggatctgggtggcccaacggcaaacatgtaccac
ctaggctgcactagcgaaaaggccgagagcacttgccgccgtcaatcttgtatctatcca
tcgatttgtggtcatatggataccgaccatcagccgaccatcgacttgtaccgcgccgcc
cgtgatgtaccggggatcaagaaggtcttgatcgcctctggtgtgcgttatgacttggct
accgaagatccacgctacgttaaagaactcgcgactcaccatgttggtggttaccttaag
attgctccagagcacacagaggaagggccgcttaacaagatgatgaagccgggaatgggc
acttacgacaagtttaaaacgcttttcgataagtactcacaagaggcgggtaagaaacag
tatttaattccttactttatctcggcgcatcctggtaccactaatgaagatatggtgaat
ctggcgttatggctcaaggctgagaagtttaagctcgatcaggtgcagaacttctaccca
tcaccgatggcgaatgcgaccaccatttaccacacagagcttaactcgcttaaaaacgtt
aagcacgatagtgaacaggtcactgtgccgaagaaaggccgtcagcgtaagctacataag
gccttgctgcgttatcacgactcggcaggctggccgctgatccgtgaagcgttaattgag
atgggcaaagagaaattaattggtaatggcccatcttgcttagtcccagtggagacgcgc
caagagcgagaagcaaacagagctaatagtaagacgtctaacgctaaagatgatggcaaa
ggtaagaaggcctttacccgtttctctggcgatcaatttgatgatcgtaaatctggccag
aataagtctagtcagaataagtctggccagaaaaagtcaggtggtaataaagcgggtcaa
ggcaagccggatcaaaacagatctggccaaggtgctaaaacaggcgctaagccaacaggt
aagcgccctccaaagaaaaatgcttggggcaccacgcctaaacaccaaagatag
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