Shewanella halifaxensis: Shal_4064
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Entry
Shal_4064 CDS
T00654
Name
(GenBank) DNA-cytosine methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
shl
Shewanella halifaxensis
Pathway
shl00270
Cysteine and methionine metabolism
shl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Shal_4064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shl03000
]
Shal_4064
03032 DNA replication proteins [BR:
shl03032
]
Shal_4064
03036 Chromosome and associated proteins [BR:
shl03036
]
Shal_4064
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
shl02048
]
Shal_4064
Enzymes [BR:
shl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
Shal_4064
Transcription factors [BR:
shl03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
Shal_4064
DNA replication proteins [BR:
shl03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
Shal_4064
Chromosome and associated proteins [BR:
shl03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
Shal_4064
Prokaryotic defense system [BR:
shl02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
Shal_4064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
ABZ78604
UniProt:
B0TL59
LinkDB
All DBs
Position
4948538..4950130
Genome browser
AA seq
530 aa
AA seq
DB search
MNHIELFSGCGGLSLGLEQSGFELTMANELSPMAAESFAYNFFNENLDELAINDKQATHT
LWLNSNYAELKPRLRENPFTFPAFDEAGTSDIPTDASELKGKLVVGSIVELNRLLDSNEE
LTKQLRTAFGSQGGLDLVSGGPPCQSFSMAGLRKRDCDKNTLPWEFAKFVKHTQPKVAML
ENVTGILRAFKDDEGNSFHAWYEVAKVFASIGYVPLCLHINARLAGIAQNRPRFIMIAVR
FDHYETIAGGFEVGDTNTKLFSPSLKFYQLVQESGSELPFGHLDYFDTTKPIHRSLFESS
FLAGLVNGEMVTVREALDDLKQKYPSKPSDFITSLNATFNHLPQWLKSPEGSEWPNHEYR
NNGEVVQRRFRLYQVLQTIDERWITKAIFSILKGNATELDDDAWAVCREYKYLQIDHTLK
VFESKQDFIQYLRDHPTKKQTQKALVANAPAPAALSIPDDACHYDEHELRVLTVREMARI
QSFPDNFVFRSKVTTGGHYRKFEVPQYTQVGNAVPPLLGLKLGNCISQLL
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
ttgaaccatatagaactattttctggatgtggggggctttctctaggcttagagcaaagc
ggctttgagctcaccatggcaaatgaactttctccaatggctgcagagtcatttgcatac
aatttttttaatgaaaatttagacgaattagcaataaacgataaacaggctacacataca
ctttggctaaatagcaattatgccgaactgaaacctagattacgtgaaaacccatttacc
tttcccgcattcgatgaggcaggtacaagtgatatccctactgatgcctcagaactcaaa
ggaaaattggtagttggcagcattgtcgaactcaaccgtctactagatagcaacgaagag
ctaactaagcaactcagaacagcttttggatctcaaggtggtttagacttggtatcaggt
ggaccaccttgtcaaagtttcagcatggcaggtcttcgcaagcgtgattgtgataaaaat
acactcccatgggagtttgccaagtttgttaagcatactcagcctaaagttgcgatgctt
gagaatgttacgggaatcctaagagcttttaaagacgatgaaggcaacagctttcatgct
tggtatgaagtcgctaaggtgtttgcctctatcggttacgtaccgctatgcttacatata
aatgctcgcctcgcaggaatagcccagaacaggccgcgtttcattatgattgctgtaagg
tttgatcattatgagacgattgctggtggatttgaggttggtgataccaatacgaaacta
ttttctccatcattaaagttttatcaattggttcaggaatcaggcagtgagttaccattc
ggccatttggattacttcgatacaactaaaccgatccaccgtagtttatttgaaagctca
tttctagcaggattagttaatggtgagatggttaccgttcgtgaagcactggatgattta
aagcaaaaatacccttcaaagccttcagattttataacttcactaaacgcaacttttaat
catttacctcagtggttaaaatcaccagaagggtctgaatggccgaaccatgaataccgc
aataacggtgaagtagtacaacgccgcttccggttatatcaagtacttcaaactattgat
gaacgttggatcactaaagctattttttcgatactaaagggcaatgcgactgaattggac
gatgatgcatgggctgtatgtcgtgaatataaatacttgcaaatagatcatacgctaaaa
gtttttgagtctaagcaagacttcattcagtaccttcgtgaccacccgactaagaagcaa
acacaaaaagctttagtggcaaacgccccagctcctgcagctctctctattcccgatgac
gcttgccactatgatgagcatgagcttagagttctaactgtacgagaaatggcaagaata
caatcctttccggataattttgtgttccgctctaaagtgactactggtggacattatcgt
aaatttgaggtgcctcaatatactcaagtaggtaatgctgttccgccgctattaggctta
aaactagggaattgtatttcacagctattataa
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