Shewanella halifaxensis: Shal_4154
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Entry
Shal_4154 CDS
T00654
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shl03016
]
Shal_4154
Enzymes [BR:
shl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
Shal_4154
Transfer RNA biogenesis [BR:
shl03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
Shal_4154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_4
Methyltransf_25
Methyltransf_15
MTS
TRM5-TYW2_MTfase
Methyltransf_31
PrmA
TRM
Cons_hypoth95
Methyltransf_11
Methyltransf_12
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
ABZ78694
UniProt:
B0TMV6
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All DBs
Position
5055249..5056346
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AA seq
365 aa
AA seq
DB search
MNLAAMDPTTYDVQLETKRVKLTQLFADFDTPELETFSSEPAHYRMRAEFRVWHEGEDLY
YYMFDKELNSKVRCDQFLPASELINKMMPALVELLKPNTILRHRLFQIDFLSTLSGEILV
SLLYHKQLDSEWEQQAKILKQTLSTQFNVNLIGRARKQKIIFDKDFVVESLNVAGKQLQY
HQIENSFTQPNGKVSVKMLEWAIDVTKNSTGDLLELYCGNGNFSIALAQNFDRVLATELA
KPSVESAQYNIKVNQVENLQIIRMSAEDFTEAMAKKRSFRRLEGIDLDSYNCNTIFVDPP
RAGLDADTVKLVQGYERIVYISCNPHTLLDNLAELSKTHKITRFALFDQFPYTDHMESGV
FLEKR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagcagcaatggatcctacaacctatgatgtgcaactcgaaacgaagcgcgtc
aagttaacgcagttatttgctgattttgatacccctgaactagaaacattcagctcagag
ccagcacattatcgtatgcgtgcagagtttagagtttggcatgaaggcgaagacctctat
tactatatgttcgataaagaacttaatagcaaggtccgctgcgatcagtttctaccagca
agcgagctcatcaataagatgatgcctgccctagttgagctattaaagccaaatactatt
ttgcgtcatcgcttattccaaattgattttctatcgacgctcagtggcgagatcttagtt
tcattgctttaccacaagcagcttgatagtgaatgggagcagcaagccaagatcttaaag
cagactcttagtactcagtttaacgttaacttaattggtcgtgcacgaaagcaaaaaatc
atctttgataaagatttcgttgttgagtcgcttaatgttgctggtaagcaattacagtat
catcaaattgaaaatagctttactcagcctaacggcaaggtatcggttaagatgcttgag
tgggcaattgatgtcactaaaaacagcactggtgatttgctagagctctactgtggtaac
ggtaacttctctatcgctttagcacagaacttcgaccgcgtgttagctaccgagcttgct
aagccatcggttgagtctgctcagtacaacatcaaggtcaatcaggtcgaaaacctgcag
atcatccgtatgtctgccgaggatttcaccgaagctatggctaagaagcgtagctttaga
cgtttagaaggcatagatctcgatagctataactgtaataccatttttgtcgatccacca
cgcgcaggcttggatgctgacaccgttaagctggtacaaggttatgagcgtatcgtttat
atctcatgtaacccccataccttactcgataacttagcagagctgagcaagacccataag
atcactcgttttgctctatttgatcagttcccgtataccgaccatatggagtctggggta
tttttggaaaagcgttaa
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