Shewanella halifaxensis: Shal_4237
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Entry
Shal_4237 CDS
T00654
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K10943
two-component system, response regulator FlrC
Organism
shl
Shewanella halifaxensis
Pathway
shl02020
Two-component system
shl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Shal_4237
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Shal_4237
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
shl02022
]
Shal_4237
02035 Bacterial motility proteins [BR:
shl02035
]
Shal_4237
Two-component system [BR:
shl02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
Shal_4237
Bacterial motility proteins [BR:
shl02035
]
Flagellar system
Flagellar assembly proteins
Others
Shal_4237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
AAA
AAA_2
AAA_19
AAA_22
nSTAND3
AAA_3
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABZ78777
UniProt:
B0TPH6
LinkDB
All DBs
Position
5144650..5145957
Genome browser
AA seq
435 aa
AA seq
DB search
MNRSSLRFVDAELSPPSKNRLLQQGFNLWESDSKKSPWLSLVNLSHCTSQNVAVQLRQFP
GKHQVALLNPEQTELASIAMQCGVQDYLLLPIDEEQLCSLLQRLRRLELPNNELICAAPV
SRQLLMLAHRAANTEATVLLTGESGTGKEPLARYIHRHSNRTDKPFIAINCAAIPESILE
SILFGHVKGAFTGATTDQIGKFELANGGTLLLDEIGEMPLLLQAKLLRVLQEREVERLGS
HKSITLDIRVIAATNKDLRQAVQDGKFREDLFYRLDVLPIKILPLRQRKEDILPIAEHFL
QRYKILAANQQCYFSEQARNLLLSHDWPGNVRELENTIQRALVMRRGQALQAEELGLVNQ
DGSALVEQNELGLKASKRQAEFQYIIDTLKRYNGHRNNTAQALGMTTRALRYKLVQMREE
GIDIDQILSQSGHAA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgttctagtttaaggtttgtcgacgctgagctatcaccaccgagcaaaaataga
cttctacaacaaggcttcaacctctgggaatccgatagtaaaaagagtccttggttaagc
ctggtcaacctttctcattgcacaagtcagaatgtggcagtacaactgcgacaatttccg
ggtaagcaccaagtggcgctactcaacccagaacaaactgagctcgccagtattgccatg
cagtgtggtgtgcaagattatctattattgccgatagatgaagaacagctgtgctcactg
ctccagaggctgcgcaggttagaactccctaataacgagttaatttgcgctgcacctgta
agtcgccagctgctaatgctggcccatcgtgccgccaataccgaagcgacggtactactc
actggcgaaagcggcaccggcaaagaaccgctggctcgttatattcatcgtcactccaat
cgtacagataaaccctttattgcaattaactgcgccgctatccctgaaagtattttagag
tcaattctgtttggacacgtcaaaggcgcatttacaggggcgacaactgaccaaatcggt
aaattcgaactcgctaatggcggtacgctgctgctcgacgaaataggtgaaatgccactg
ctgttgcaagctaagctactgcgtgtattgcaagagagagaggttgaacgattaggcagt
cacaaatcgattacgctagatattcgggtcattgccgccaccaataaagatctgcgccaa
gcagtgcaagatggcaaatttagagaagatctcttctaccgcttagatgtgttgccgatc
aagatcttgccactgcgtcagcgcaaagaggatatcttgcctatcgccgagcatttcttg
cagcgctataaaatccttgctgctaatcagcaatgctacttcagtgagcaagcacgaaac
ttactcttaagtcatgactggcctggcaatgtgcgtgaactagaaaataccattcaacga
gccctagtgatgcgtcgcggtcaagccttacaagccgaagagctaggtctcgtgaatcaa
gatggctcagccttggtggaacaaaatgagttaggtcttaaagcctcaaaacgtcaagca
gaattccagtacatcatagatacccttaagcgctataacggccaccgtaacaacacggct
caagccttaggtatgactaccagagcattaagatacaagttagtacagatgcgtgaagaa
ggcattgatatcgaccagatcctgtcgcaatcgggtcatgctgcataa
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