Shewanella sp. MR-7: Shewmr7_0016
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Entry
Shewmr7_0016 CDS
T00389
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
shm
Shewanella sp. MR-7
Pathway
shm00071
Fatty acid degradation
shm00280
Valine, leucine and isoleucine degradation
shm00310
Lysine degradation
shm00362
Benzoate degradation
shm00380
Tryptophan metabolism
shm00410
beta-Alanine metabolism
shm00640
Propanoate metabolism
shm00650
Butanoate metabolism
shm00907
Pinene, camphor and geraniol degradation
shm00930
Caprolactam degradation
shm01100
Metabolic pathways
shm01110
Biosynthesis of secondary metabolites
shm01120
Microbial metabolism in diverse environments
shm01200
Carbon metabolism
shm01212
Fatty acid metabolism
Module
shm_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Shewmr7_0016
00650 Butanoate metabolism
Shewmr7_0016
09103 Lipid metabolism
00071 Fatty acid degradation
Shewmr7_0016
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Shewmr7_0016
00310 Lysine degradation
Shewmr7_0016
00380 Tryptophan metabolism
Shewmr7_0016
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Shewmr7_0016
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Shewmr7_0016
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Shewmr7_0016
00930 Caprolactam degradation
Shewmr7_0016
Enzymes [BR:
shm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Shewmr7_0016
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Shewmr7_0016
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Shewmr7_0016
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Shewmr7_0016
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ABI41022
UniProt:
Q0I0T3
LinkDB
All DBs
Position
complement(19875..22025)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIAKLCFNAPGSVNKFDRETLASLDAALDSIKQQSNIQALVLTSG
KDTFIVGADITEFLGLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCET
ILATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRPEDALK
VGAVDAVVAPEALEAAAIQMLKDAVAEKLDWQARRHRKMSPLTLPKLEAMMSFTTAKGMV
FAVAGKHYPAPMAAVSVVEQAATKGRSDALQIEHQAFIKLAKTDVAKALIGIFLNDQLVK
GKAKKAGKLAKDVKSAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLGEAAKLL
SAQVARGRSTPEKMAKVLNNITPALDYAPVNHADVVVEAVVEHPKVKAQVLAEVEQYVSE
DAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKSGNDAIDVMFENKRLGQKNGKGFYAYSVDSRGKP
KKDVDPTSYELLKAAFGEQKAFDADEIIARTMIPMIIETVRCLEEGIVASPAEADMGLVY
GLGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRALAANNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacaattcaggttgagttactcgaggataatattgccaagctg
tgctttaacgcacccggttcggtgaacaaattcgacagagaaacactcgcctcactcgat
gccgcattagatagcattaaacaacaatcaaacattcaggctttagtgctgacctcaggt
aaagatacctttatcgtgggtgccgacattactgaatttttaggcttattcgcacaggat
gatgcggtactgctctcttgggttgaacaggccaacgccgtattcaacaaactcgaagat
ttacctttcccaaccgcttcagcgattaaaggtttcgccctaggcggcggttgtgaaact
attctggcaacggatttccgtatcgccgacaccacagccaaaatcggcctgcccgaaacc
aaactgggcattatcccaggctttggtggcacagtgcgtttaccacgtgtgattggtgcg
gataacgcccttgagtggatcaccacgggtaaagatcagcgtccagaagatgccttaaaa
gtcggtgcggttgatgctgttgtcgcgccagaggctttagaagccgccgccattcaaatg
ctaaaagatgcagttgcagaaaagcttgattggcaagcccgtcgccaccgtaagatgtca
ccactgaccctaccaaaactcgaagccatgatgtctttcactaccgctaaaggcatggtg
tttgcggttgcgggtaaacactacccagcaccaatggcggcagtcagcgtagttgaacaa
gcggcgaccaaaggccgcagcgacgcactgcaaattgaacatcaagcgtttatcaagtta
gcgaaaaccgatgttgccaaggcgttgatcggtatcttcttgaatgaccaattagtcaaa
ggcaaggccaagaaagcgggcaaactcgccaaagatgtgaaaagcgccgccgtattaggt
gctggcatcatgggtggcggtatcgcttaccaaagcgccagcaaaggcacgccaatcgtg
atgaaggatatcgctcaacctgcattagatttaggtttaggcgaagccgctaaactgtta
tctgcacaagttgctcgcggccgctctaccccagaaaaaatggctaaggtgctgaacaac
atcactccagccttagactatgctccagttaaccatgctgacgtggttgtcgaagccgta
gttgagcatccaaaagtgaaggcacaagtactggctgaagtagagcaatacgtgagtgaa
gatgcgattatcgcctctaacacgtcaactatttcaatcaacctgctcgcgaagagcatg
aagaagcctgagcgtttctgcggtatgcacttcttcaacccagtgcacaaaatgccattg
gttgaagttattcgtggcgagcacagctcagaagaaaccatcgcatctgttgttgcctac
gccagcaaaatgggtaaaaccccaatcgttgttaacgattgcccgggtttcttcgttaac
cgcgtactcttcccttactttgcgggctttaacggcctgctcgccgaaggtggcgacttt
gccgctatcgataaagtgatggaaaaacaattcggctggccaatgggtcctgcttacctg
ctagacgttgtcggcctagacacgggtcaccacgcgcaagcggtaatggccgaaggcttc
cccgatcgtatgggcaaatctggcaatgacgcgattgacgtgatgtttgagaacaagcgt
ctcggtcagaagaatggtaaaggtttctacgcttactctgtagatagccgtggtaaacca
aagaaagatgtcgacccaaccagctacgagctgctgaaggccgcctttggtgagcaaaaa
gcattcgatgcggatgaaatcatcgcccgcactatgatcccaatgattatcgaaaccgtt
cgctgtttagaagaaggcattgtggcatcacctgccgaagcggatatgggcttggtatat
ggtttaggtttccctccattccgtggtggtgtattccgttacttagatactatgggcgta
gcgaactttgtcgccttagctgataaatacgctcacttaggtggtttgtatcaagtcacc
gacgccatgcgcgcccttgcagccaacaacggtagctactaccaagcctaa
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