Shewanella sp. MR-7: Shewmr7_0102
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Entry
Shewmr7_0102 CDS
T00389
Name
(GenBank) selenocysteine-specific translation elongation factor SelB
KO
K03833
selenocysteine-specific elongation factor
Organism
shm
Shewanella sp. MR-7
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
shm03012
]
Shewmr7_0102
Translation factors [BR:
shm03012
]
Eukaryotic type
Elongation factors
Shewmr7_0102
Prokaryotic type
Shewmr7_0102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
SelB-wing_3
SelB-wing_2
bact_SelB_WH_2nd
MMR_HSR1
GTP_EFTU_D2
SelB-wing_1_3
SRPRB
Motif
Other DBs
NCBI-ProteinID:
ABI41108
UniProt:
Q0I0J7
LinkDB
All DBs
Position
117412..119433
Genome browser
AA seq
673 aa
AA seq
DB search
MIMVTAGHVDHGKSTLIRALTGMNTDRLPEEKRRGMTIDLGYAFMPLQDGTRLAFIDVPG
HEKFINNMLVGVSHVRHALLVLACDDGVMPQTREHLQILALLPLNSLTLVLTKRDLVDDQ
TAAKLTLEGMALLAEYGIEASGVFEVCGNDAGDAGVDTLKQHILEIAEQQSTQAEDASSF
RMTLDRAFSVKGAGCVVTGTVISGSVCVGDSLYSSGQKAKLRVRGIHCQGMEVHRALSGT
RVALNLTGVDNHRAPARGDWLSSLPQAELCARPVVQIRSFEPLTHWQNVHCHHGADHTLG
RVSLLDEADEQGRYLAEIVLDKPLLLCQDDPIVLRHVGGKQTLGAGRVLALKVPNRKKRT
PERVSKLQQLAKLSNPVNVLALLGQSEALSIDEIRWRWQLTDEGLAAMLAQAGLTRLGAY
GLSTQLLEQEKQQFIELLREYHQQHPDQLGLGRNRLQRMSHNVLPSELANKVLDSLCQDG
QMVLRGALLQLADHRIVLDSEAQQCWQRLAPWLALQTSPVWVTEMGEYLELEPAKLRLLC
FQLVQQGFITAVVKDRYLLSEQLCHYANLVREHVETHGKLETAEFKDLIGLGRKVSIQLL
EFFDRSGFTRRKYRSNSREIRDGELFYSHENWRKNIGVEPTQDCWQPYPDLKSGRLTGDD
VLPFEDRPIVENA
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgattatggtcaccgcgggccacgtcgaccacggcaagagcacgctgatccgtgcctta
acggggatgaacaccgacaggctccccgaagaaaaacgccgtggcatgaccatcgatctc
ggctacgcctttatgccactgcaagatggtactcgcttagcctttatcgatgtgcccggc
catgaaaaattcatcaataacatgctggtgggcgtgagccatgtgcgccacgcgctgctg
gtgttggcctgtgacgacggcgtgatgccgcaaacccgcgagcatctgcaaatccttgcg
cttttaccgctcaatagtttgaccttagtgctgaccaagcgggatttggtcgatgaccaa
accgccgccaagttgaccctagaggggatggcgctgcttgccgaatacggtatcgaggcc
agtggcgtgtttgaagtctgcgggaatgatgcaggcgatgcgggggtagacacccttaaa
caacatattttagagatcgccgagcagcaatcgacccaagcggaagatgccagcagcttt
aggatgacgctcgatcgcgcctttagcgttaaaggcgccggctgcgtggtcacgggcact
gtgattagcggcagtgtgtgtgtcggcgatagcctctacagctctgggcaaaaagcaaaa
ttacgggtgcgcggcattcactgccaagggatggaagtccatcgagcactcagtggcact
cgtgtcgcgttgaatcttaccggtgtcgataaccacagggcgccagcccgcggtgactgg
ttaagcagcctgcctcaggcggagctgtgcgccagacccgtagtgcaaattcgcagtttt
gaacccttaacccattggcaaaatgtgcattgtcaccacggcgccgaccatacccttggt
cgagtgtcactactcgatgaagccgatgagcaggggcgttatctggccgaaattgtgctc
gataagccgctgctgctgtgtcaggacgacccgatagtgctcaggcatgttggtggcaag
caaaccctgggcgctgggcgggtgctggcattaaaagtccccaatcgtaagaagcgtacg
ccggagcgtgtcagtaagctgcaacagctggccaagctctccaatccggtgaatgtgctg
gcgctactcggccagagcgaagcgctcagtattgatgaaatccgttggcgctggcagcta
accgatgaagggctcgcagccatgctggcacaggcggggctgactcgcctcggtgcctat
gggctatcgacccagctactcgagcaagaaaaacagcagtttatcgagctgttacgtgag
tatcaccaacaacatcccgaccaattagggctagggcgtaatcgtctgcaacgcatgagc
cacaacgtattgcctagcgagcttgccaataaggtgctcgatagcctctgccaagacggt
cagatggtgctgcgcggcgctctgctgcagttggcggaccacagaattgtcctcgatagc
gaggcgcagcagtgctggcaacgcttggccccttggttggcactacaaacctcgcccgtg
tgggtgactgagatgggggaatatctcgaactcgagcccgccaaactcagattgctgtgt
tttcaactggtgcaacagggctttattaccgctgtggtgaaggacagatatttgctgagt
gagcagttatgccattacgccaatctggtgcgtgagcatgtggaaacccacggcaagctc
gaaaccgcagagtttaaggatctgattggcctaggccgtaaggtcagtattcagctgttg
gagttttttgaccgcagtggttttacccgtaggaaatatcgcagtaacagtcgggagatc
cgggatggggaactgttttattcccatgagaattggcggaagaacataggagtcgaacct
acccaggactgctggcagccctacccggatttgaaatccggacgcctcaccggagacgac
gttcttccattcgaagacagaccgatagtagaaaatgcttaa
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