Shewanella sp. MR-7: Shewmr7_0533
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Entry
Shewmr7_0533 CDS
T00389
Name
(GenBank) single-strand binding protein
KO
K03111
single-strand DNA-binding protein
Organism
shm
Shewanella sp. MR-7
Pathway
shm03030
DNA replication
shm03430
Mismatch repair
shm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Shewmr7_0533
03430 Mismatch repair
Shewmr7_0533
03440 Homologous recombination
Shewmr7_0533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shm03032
]
Shewmr7_0533
03400 DNA repair and recombination proteins [BR:
shm03400
]
Shewmr7_0533
03029 Mitochondrial biogenesis [BR:
shm03029
]
Shewmr7_0533
DNA replication proteins [BR:
shm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Shewmr7_0533
DNA repair and recombination proteins [BR:
shm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Shewmr7_0533
TLS (translesion DNA synthesis) factors
Other SOS response factors
Shewmr7_0533
Mitochondrial biogenesis [BR:
shm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
Shewmr7_0533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
Lin-8
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABI41536
UniProt:
Q0HZB9
LinkDB
All DBs
Position
612616..613326
Genome browser
AA seq
236 aa
AA seq
DB search
MASRGVNKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQGQQQERTEWHRVVLF
GKLAEITGEYLRKGSQVYLEGKLQTRKWKDQSGQDRYSTEVVIDQSGSMQMLGGRNQGQS
QGQGQGAPMGGMQQNAGYQAAPAQTAPAQNQYAPAQQSYQAPAQQPQSGYTQQPAQQSYG
QQQAQPHAQPQQGGYAPKPAAPAYQAPSAPAQRPAPQPQQNFTPDLDDGWDDDIPF
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgtggtgttaacaaggtaattttggttggcaatttgggacaagatccagaa
gtacgttacatgccaaacggtaacgcagtcgctaacatcacagtagcgaccagcgaatcg
tggaaagaccaacaaggtcaacagcaagagcgtactgaatggcaccgtgtggttctgttt
ggtaagttggctgaaattacgggtgagtacctgcgtaaaggttcacaggtttacctcgaa
ggtaaactgcagacgcgtaagtggaaagaccaaagcggtcaagatcgttacagcactgaa
gtggttatcgaccaaagcggtagcatgcaaatgttaggtggtcgcaatcaaggccaaagt
caaggtcaaggccaaggtgcccctatgggtggcatgcaacaaaacgcgggttaccaagcg
gcaccggctcaaactgcgccagcgcaaaaccaatacgcgccagcacagcaaagttaccaa
gcacctgcacagcagccccaatctggttacactcaacagccagctcagcaaagctatggt
cagcaacaagcgcagccccacgcacagccacagcaaggtggttatgcgcctaagcctgct
gctccagcgtatcaagcgccatcggctccagcacaacgtccagcgccacagccacaacaa
aacttcaccccagatttggatgatggttgggacgacgatatcccgttctaa
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integrated database retrieval system
