Shewanella sp. MR-7: Shewmr7_0882
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Entry
Shewmr7_0882 CDS
T00389
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis family
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
shm
Shewanella sp. MR-7
Brite
KEGG Orthology (KO) [BR:
shm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shm03000
]
Shewmr7_0882
Transcription factors [BR:
shm03000
]
Prokaryotic type
Helix-turn-helix
Other families
Shewmr7_0882
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
AAA_5
Mg_chelatase
AAA
MCM
AAA_2
GAF_2
IstB_IS21
HTH_8
AAA_16
AAA_19
AAA_22
AAA_7
AAA_14
DUF815
Motif
Other DBs
NCBI-ProteinID:
ABI41881
UniProt:
Q0HYC4
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All DBs
Position
complement(1005642..1007198)
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AA seq
518 aa
AA seq
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MALSQTDLTRIALDITSGLAHRDRFTRLLDTVRANLHCDAAALLTFHGHYFTPLAIDGLN
EDVLGRRFILNEHPRLEAIARAGDIVRFPADSELADPYDGLIPNQTGALKVHACIGLPLF
ADEQLIGAVTIDAFNPLQFDQFSNTELRSLSAIAAASLSNALLVEKLERMALNSHSTHVQ
EKSPNLNHDAEIIGNSPQMQSLNREIEVVAHSDLNVLILGETGTGKELVAQAIHQKSARQ
HKPLVYLNCAALPESVAESELFGHIKGAFTGAISHRSGKFEMADKGTLFLDEIGELPLTL
QAKLLRVLQYGDIQKVGDDRSLKVDVRIIAATNKDLKTEVLAGRFRADLYHRLSVFPLLV
PPLREREQDITLLSGFFAERYRQKLGMKQLNFSPSSLMLLNQYTWPGNVRELEHAIHRAT
VLARVSAQDGCCTIAPQHFDLPFKQSSIETNALASLSVNDMQLRPLEGARLALATDAFQR
DYIKQVLTAQNGNWAASARALGLDPGNLHRLAKRLRLK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcccttagtcaaaccgaccttacccgtatcgctctggatatcacctctggtttagcc
cacagggaccgctttacacgcttgctcgatacggtgagagctaacctgcactgtgatgcg
gctgcactcctcaccttccatggacactattttaccccgctggctatcgacggtttgaac
gaggatgtgctcggcagacgctttatcctgaatgagcatccaaggcttgaggcaattgcc
cgtgcgggggatatagtgcgcttccccgccgacagtgaacttgccgatccctacgatggg
ttgatccccaatcaaacaggggcattgaaggtccatgcctgtatcggacttcctttattt
gccgacgagcagcttatcggtgccgtaactatcgatgcctttaatcccctacagttcgac
caattcagcaataccgaacttcgcagcttaagtgcgattgccgccgcatccttaagcaac
gccctgctggttgaaaagttggagcgcatggcactcaatagccactcgacccatgtgcag
gaaaagagccccaaccttaaccacgatgccgaaatcatcggtaactcgccccagatgcaa
agcttgaatcgggagatagaagttgttgcccatagcgaccttaacgtactgattttaggc
gagactggaacaggcaaagaattagttgcacaggcaatccatcaaaaatccgcgagacag
cacaaacccttggtttatctcaattgcgcggcgcttcctgaatcggttgccgaaagcgaa
ctcttcggccatatcaaaggcgcgtttaccggcgccatcagccatcgcagtggcaagttt
gaaatggccgataagggcacactctttctcgatgagattggcgagcttccgctcacgctt
caggccaagttgctgcgggtattacaatatggcgatattcaaaaagtgggggatgatcgc
agtcttaaagtcgatgtgcgtatcattgccgccaccaataaagatcttaaaacagaagtg
ctggctggccgctttagggccgatctctaccatagattaagtgtgttccccctgctagta
ccgcccctgcgggaacgtgagcaggacatcaccttgttgagcggattcttcgccgagcga
tatcggcaaaaactcgggatgaaacaactcaacttcagccccagtagcttaatgttgctc
aatcaatatacttggccgggcaatgtgcgtgagctagagcacgccattcacagggcgacc
gtactggcgcgagtctcggcacaggatggctgctgcaccatagcaccacaacattttgat
ttaccgtttaaacaaagctctatagagacaaacgcattggcaagcttaagcgtaaacgat
atgcagcttcgcccgttggaaggtgccaggttagccctagcgaccgacgcctttcagcgt
gactacatcaaacaagtgctcacggcacaaaacggcaattgggcagcctcggccagagcc
ttaggactcgacccaggcaatctgcatcgcctcgcaaaacgcttaaggctaaaataa
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